| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3605 |
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| Symbol | |
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| ID | 5749189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3964440 |
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| End bp | 3965489 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298706 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001564624 |
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| Protein GI | 160899042 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0125063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCG CGAACGCTGT GGATGCTGCG AAAGCCGTGA ATGCCATCGA CACCGGGGCA
CGGCAGCCAC CGGCCCCCAC CCGGCCACGC TGGGGCCGGC TGGCCTTGCA GCTCGCCATC
GGCTGGCTGC TGATATTGCT GCTGGGCTGG CTGGCGCACA ACGCCAGCCG CAACATGGCC
GCGCGCGGCA TTGCCGGGGG CTTCGGCTTT CTGGAGCAGA CGGCCGGCTT TTCCATCTCC
GAAGGGCTGC TGCCCTACGA GCCCGGCGAC AGCTACCTGC GTGCGGTCGC AGCCGGCGTG
GCCAACACGG TTCGCGCCGC CGTGCCCGCG CTCGCGCTGG CAACCATGCT GGGCCTGCTG
CTGGGCGTGG CCGCCGTGGC AAGGCATCCG CTGCTGCGCG GCGCCGTGCG CCTCTATGTC
GATGTGGCGC GAAATATCCC GTTGCTGGTG CAGGTGCTGC TGTGGTATTT CGCGCTGACT
TCGCTGCTGC CCGATGTGGA CCACCCTCTG GCCATCGGCC CCCTGGGCTT TCTGAGCAAG
GCGGGGCTGG CCCTGCCCGG CCCGGTGTAC GACAGCGCGG CGGGCTGGCA CTGGAGCTCG
CCGCAGCCGG GCATGTTCAG CATTGACGGA GGACTGGCGC TGACGCCGGA ATTCCTGGCC
CTGGTGGGAG CCCTGGGCCT GTATGCCGCC GCCTATTGCG CGGAAATCGT GCGCGCCGGT
CTGCAGGCCG TGCCGCGCGG GCAATGGAAT GCCGCCTCGG CCCTGGGCAT GCGCCGCGGC
CAGCAGTTGC GCCTGGTCGT GCTGCCGCAG GCCCTGCGGG TGATCATTCC CCCCTATACC
AACCTGGCGC TCAGCACCAT CAAGAACTCC TCGCTGGCCG TGGCCATCGG CTACCCCGAC
GTGGTGATGG TCGCCAACAC CGCCATGAGC CAGACCGGCC AGGCCATCGA GTGCGTGACC
ATCATCGCGG TGGTCTACCT GGCCATCAAC CTGCTGACCT CGCTGGCATT GAATGCCTTC
AACCAGCGCA GTGCCTTCAT CACACGCTAG
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| Protein sequence | MNAANAVDAA KAVNAIDTGA RQPPAPTRPR WGRLALQLAI GWLLILLLGW LAHNASRNMA
ARGIAGGFGF LEQTAGFSIS EGLLPYEPGD SYLRAVAAGV ANTVRAAVPA LALATMLGLL
LGVAAVARHP LLRGAVRLYV DVARNIPLLV QVLLWYFALT SLLPDVDHPL AIGPLGFLSK
AGLALPGPVY DSAAGWHWSS PQPGMFSIDG GLALTPEFLA LVGALGLYAA AYCAEIVRAG
LQAVPRGQWN AASALGMRRG QQLRLVVLPQ ALRVIIPPYT NLALSTIKNS SLAVAIGYPD
VVMVANTAMS QTGQAIECVT IIAVVYLAIN LLTSLALNAF NQRSAFITR
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