| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3604 |
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| Symbol | |
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| ID | 5749188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3963340 |
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| End bp | 3964422 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641298705 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001564623 |
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| Protein GI | 160899041 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.436003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0209416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCG TACTCCGCGC ACCGGCCCTG CCGGTGGCCC CGCCACGGGT TCCGCTGGCG
CAGCGCCTGC GCGCCAGCCT GTTTCCGGAT GCGCTCTCCG GGCTCATCAC CGCCACGCTG
CTGCTGGCCG CGCTGTGGGC GGGCTGGAAG CTGCTGGCCT GGGGCCTGCT CGACGCCGAA
ACCGCAGCCA ACCCCAACAC ATGCCGCGCT GCGGCCGGCG CCTGCTGGGG CGTGGTGCGC
GACAAGTACC GTCTGGTGTT CCTGGGGCGC TACCCCATGG CCGAACAGTG GCGCCCCGTC
GCCGCCAGCC TGCTGCTGCT GGGCAGCGTG GGGGTGGCGG CACTGCCGCG CTTCTTCGGC
CGCGCCGGCA TGGCAATGCT GCTGGCCGGG TTGACCGGCT TTGGCGTGCT GATGGCGGGC
GGTGTGGCCG GCCTGGCACC CGTGCCCAGC GATCTGTGGG GTGGCCTGCC GCTGACCCTG
TTCCTTGCCG TGATCGCCTG CCTGGCCGGT GTCCCGCTGG GCATTCTGCT GGCGCTGGGC
CGGCGCTCCA GCCTGCCCTT GATCCGCATC CTGTGCACGG GCTTCATCGA GGCCGTGCGC
GGCGTACCCC TGATCACGCT GCTGTTCTTC GGGGCCTTCG TGCTGCCCAT GCTGGTGCCC
GCGCAATGGC GGGTGGACCC CATGGTCCGC ATCGCCGTCT GCCTGGCGGC CTTCAGCGCC
GCCTATCTTG CCGAGGTGTT TCGCGGCGGG CTGCAGGCCG TGCCCCAGGG CCAGGTCATG
GCGGCCCAGG CCATGGGTTT CACCAGGGTG CAGGTGCTGC GCCATGTGGT CCTGCCGCAG
GCACTGCGCG TGACCATCGC GCCCACGGTG AGCAACTTCA TCGGCGCGGT GAAGGACACC
TCCCTGGTGG CGATCGTGAA CATCTACGAC ATCACTGGCT CCCTGAAGAT GGCCATGAGC
GACCCCCACT GGATTGCCTA CTTCGTGGAG ATGTACATGG TGGTCTGTAC CGTCTACCTG
CTCATCGGCC TGGGCATCGC CCGCTATGGC CGCTTCCTGG AATCGCGCTA CGCACTCCAA
TGA
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| Protein sequence | MSAVLRAPAL PVAPPRVPLA QRLRASLFPD ALSGLITATL LLAALWAGWK LLAWGLLDAE
TAANPNTCRA AAGACWGVVR DKYRLVFLGR YPMAEQWRPV AASLLLLGSV GVAALPRFFG
RAGMAMLLAG LTGFGVLMAG GVAGLAPVPS DLWGGLPLTL FLAVIACLAG VPLGILLALG
RRSSLPLIRI LCTGFIEAVR GVPLITLLFF GAFVLPMLVP AQWRVDPMVR IAVCLAAFSA
AYLAEVFRGG LQAVPQGQVM AAQAMGFTRV QVLRHVVLPQ ALRVTIAPTV SNFIGAVKDT
SLVAIVNIYD ITGSLKMAMS DPHWIAYFVE MYMVVCTVYL LIGLGIARYG RFLESRYALQ
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