| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3600 |
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| Symbol | |
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| ID | 5749184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3957501 |
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| End bp | 3959396 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298701 |
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| Product | poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_001564619 |
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| Protein GI | 160899037 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.023391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0663038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTG ACCCACTCGC TGGCCTGTCA GGCCAATCCG TCCAGCAATT CTGGAACGAG
CAATGGAGCC GCACGCTGCA GACACTGCAG CAACTGGGGC AACCAGGCCT TCCGGGAACC
CAGGGCATGC CAGGCATGCC GGACATGGCC CAGGCCTGGA AAGCGGCCGT CCCCGAACCC
GGCGCCCTGC CCGAGAACGC GCTGTCGCTG GACCCCGAAA AGCTGCTGGA GCTGCAGCGC
CAGTACCTGG ATGGTGCCAA GGCCATGGCC GAACAGGGCG GCGCCCAGGC GCTGCTGGCC
AAGGACAAGC GCTTCAACAC CGAATCGTGG GCCGGCAATC CGCTGACGGC GGCCACGGCT
GCGACCTATC TGCTCAACAG CCGCATGCTC ATGGGCCTGG CCGATGCCGT GCAGGCCGAT
GACAAGACGC GCAACCGCGT GCGCTTCGCC ATCGAGCAAT GGCTGGCGGC CATGGCGCCC
AGCAACTTCC TGGCACTCAA TGCCGAGGCT CAGAAGAAAG CCATCGAAAC CCAGGGCGAG
AGCCTGGCCC AGGGCGTGGC CAACCTGCTG GCCGACATGC GCCAGGGCCA TGTGTCCATG
ACCGACGAGA GCCTGTTCAC CGTGGGCAAG AACGTCGCCA CCACCGAAGG CGCCGTGGTG
TTCGAGAACG AGCTGTTCCA GCTCATCGAA TACAAGCCGC TGACGGACAA GGTGCACGAG
CGGCCCTTCC TCATGGTGCC GCCCTGCATC AACAAGTTCT ACATCCTGGA TCTGCAGCCC
GACAACTCGC TGATCCGCTA CGCCGTCAGC CAGGGCCATC GCACCTTCGT GATGAGCTGG
CGCAACCCCG ACGAAAGCCT GGCGCGCAAG ACCTGGGACA ACTACATCGA GGACGGCGTG
CTCACCGGCA TCCGCGTGGC GCGCGAGATC GCAGGAGCCG AGCAGATCAA TGTGCTGGGC
TTTTGCGTGG GTGGCACCAT GCTGTCCACC GCGCTGGCAG TGCTGCAGGC GCGCCATGAC
CGCGAGCATG GCGCAGTTGC CGCTCCGGCG GCGGCCAAGG CGCCTGCGGC CAAGCGCGCG
GCTGGCAGCC GCAGCGCCGC CCGCACATCC ACAGCCCGCG CCACGGCGCC GGCCGGCGTG
CCGTTTCCCG TGGCCAGCGT CACGCTGCTG ACCACCTTCA TCGACTTCAG CGACACCGGC
ATCCTCGATG TCTTCATCGA CGAATCCGTG GTGCGCTTCC GCGAGATGCA GATGGGCGAG
GGCGGTCTCA TGAAGGGCCA GGACCTGGCG TCCACCTTCA GCTTTCTGCG GCCCAACGAC
CTGGTCTGGA ACTACGTGGT GGGCAACTAC CTCAAGGGCG AGACGCCCCC GCCGTTCGAC
CTGCTGTACT GGAACAGCGA CTCCACCAAC CTGCCCGGCC CCTACTACGC CTGGTACCTG
CGCAACCTCT ACCTGGAAAA CAAGCTGGCC CAGCCCGGCG CGCTGACCGT CTGCGGCGAG
CGCATCGACA TGCACCAACT GCGCCTGCCG GCCTATATCT ATGGCTCGCG GGAGGACCAC
ATCGTGCCCG TGGGCGGCTC CTATGCGTCC ACCCAGGTGC TGGGTGGCGA CAAGCGTTTT
GTGATGGGCG CGTCGGGCCA CATCGCGGGC GTGATCAATC CGCCGGCCAA GAAAAAGCGC
AGCTACTGGC TGCGCGAGGA CGGCCAGTTG CCGCCCACGC TCAAGGAGTG GCAGGCCGGC
GCCGACGAGT ACCCGGGCAG CTGGTGGGCC GACTGGAGCC CCTGGCTGGC CGAGCACGGC
GGCAAGCTGG TCGCAGCGCC AAAGCAGTAT GGCAAAGGCA GGGAATACAC GGCCATCGAG
CCGGCCCCGG GCCGCTACGT ACTGGTCAAG GCCTGA
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| Protein sequence | MNFDPLAGLS GQSVQQFWNE QWSRTLQTLQ QLGQPGLPGT QGMPGMPDMA QAWKAAVPEP
GALPENALSL DPEKLLELQR QYLDGAKAMA EQGGAQALLA KDKRFNTESW AGNPLTAATA
ATYLLNSRML MGLADAVQAD DKTRNRVRFA IEQWLAAMAP SNFLALNAEA QKKAIETQGE
SLAQGVANLL ADMRQGHVSM TDESLFTVGK NVATTEGAVV FENELFQLIE YKPLTDKVHE
RPFLMVPPCI NKFYILDLQP DNSLIRYAVS QGHRTFVMSW RNPDESLARK TWDNYIEDGV
LTGIRVAREI AGAEQINVLG FCVGGTMLST ALAVLQARHD REHGAVAAPA AAKAPAAKRA
AGSRSAARTS TARATAPAGV PFPVASVTLL TTFIDFSDTG ILDVFIDESV VRFREMQMGE
GGLMKGQDLA STFSFLRPND LVWNYVVGNY LKGETPPPFD LLYWNSDSTN LPGPYYAWYL
RNLYLENKLA QPGALTVCGE RIDMHQLRLP AYIYGSREDH IVPVGGSYAS TQVLGGDKRF
VMGASGHIAG VINPPAKKKR SYWLREDGQL PPTLKEWQAG ADEYPGSWWA DWSPWLAEHG
GKLVAAPKQY GKGREYTAIE PAPGRYVLVK A
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