Gene Daci_3598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3598 
Symbol 
ID5749182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3956259 
End bp3957104 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content73% 
IMG OID641298699 
Producthypothetical protein 
Protein accessionYP_001564617 
Protein GI160899035 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0957834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.104911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG CCCGGCCTGA CTCCCTCCCC GGCACCATCC CCGCATCCTG GCTGGTGCCC 
GAGTGGCCCG CGCCGCCGGG CGTGCACGCG CTGTGCACCT CGCGCGAAGG CGGCGTCAGC
ACGGCGCCCT GGGGCAGCCT GAACCTGGGC GACCATGTGG GCGATGACCC GCAGGCCGTG
CGCACCAACC GCCAGCGGCT GCAGGAGATC GTGCGCGCCC ATACGCCGGG CGCCTGCGCG
GTGTTCCTGC AGCAGGTGCA TGGCGTGGAT GTCGTGGCCC TGGATGCAGG CAGCGCGCAG
GGCCAGGCCT TCGATGCCTG CGTGACCCGC GCCTCGGGCG TGGTCTGCAC CATCATGGTG
GCCGACTGCC TGCCCGTGCT GCTGGCCCAT CGCAGCGGTG CCGTGGTGGG CGCGGCCCAT
GCGGGCTGGC GCGGGCTGGC GGGCGGGGTG CTGGAGACGC TGTTCGAGCG CTTTGCTGGC
CAGATCCAGA CACCGCCCGG GCAAGCGGCG CAGCAGACCC TGGCCTGGCT CGGTCCCTGC
ATCGGCCCGC GTTCCTTCGA AGTGGGCGCT GAGGTGCGCG CGGCCTTCAT CGCGCATGAC
GCGGCGGCCG GGGCGCATTT CACCGCCGTG CCGCAAGAGG GCGGGGGCGC ACCCAAGTAC
CTGGCCAACC TGGCCGGGCT TGCGCGCCAG CGCCTGGCGG CGCTGGGCAT CACCGCCATC
TACGGCAATG ACGGCGGCGA CGCATGGTGC ACGGTGCTCA ACGGCTCACG GTTCTTTTCG
CACCGGCGCG ACGCTGCCCG CCTGGGCAGC AGCGGGCGGT TCGCCGCCTG CATCTGGAAG
GACTGA
 
Protein sequence
MSAARPDSLP GTIPASWLVP EWPAPPGVHA LCTSREGGVS TAPWGSLNLG DHVGDDPQAV 
RTNRQRLQEI VRAHTPGACA VFLQQVHGVD VVALDAGSAQ GQAFDACVTR ASGVVCTIMV
ADCLPVLLAH RSGAVVGAAH AGWRGLAGGV LETLFERFAG QIQTPPGQAA QQTLAWLGPC
IGPRSFEVGA EVRAAFIAHD AAAGAHFTAV PQEGGGAPKY LANLAGLARQ RLAALGITAI
YGNDGGDAWC TVLNGSRFFS HRRDAARLGS SGRFAACIWK D