| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3595 |
|---|
| Symbol | |
|---|
| ID | 5749179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3954057 |
|---|
| End bp | 3954620 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641298696 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001564614 |
|---|
| Protein GI | 160899032 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00459276 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.106205 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTTC GCAGCCCCAT CAAGTTCTGC CGAGCCTGCG GCACGGCCGT GGTCTACCGC
ATTCCCGACG ATGGCGACAC GCGCGAACGC GCCGTGTGCC CGCACTGCCA CACCATCCAT
TACGAGAATC CGCTGAACGT GGTCGGCACC ATCCCCGTCA CCGACGACGG CCGCGTGCTG
CTGTGCAAGC GCAACATCGA GCCGCGCCGG GGCCTGTGGA CCCTGCCTGC CGGCTTCATG
GAACTGGCCG AGACCACGGC GCGCGGCGCC CAGCGCGAGA CCGATGAGGA AGCCGGTGCC
GACATCGAGA TGGGACCGCT GTTTTCCATC GTTGACGTGC CCAAGGTCAG CCAGGTCCAC
CTGTTCTACC GCGCCCGCCT GCGCAGCGAG CAGTTCTATC CAGGCCCCGA GACCATGGAG
GCCCGCCTTT TTGCCGAGGC CGAGATTCCC TGGGAGGAAC TGGCCTTTCG CACCGTGCGC
GTGACGCTGG AGCGCTACTT TGAGGACCGT GCGGCCGGCC TGCTTGACGC GCACCGCGTG
CACTCCATCG ACCTGAGCCT GTAG
|
|---|
| Protein sequence | MIFRSPIKFC RACGTAVVYR IPDDGDTRER AVCPHCHTIH YENPLNVVGT IPVTDDGRVL
LCKRNIEPRR GLWTLPAGFM ELAETTARGA QRETDEEAGA DIEMGPLFSI VDVPKVSQVH
LFYRARLRSE QFYPGPETME ARLFAEAEIP WEELAFRTVR VTLERYFEDR AAGLLDAHRV
HSIDLSL
|
|---|
| |