| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3590 |
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| Symbol | |
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| ID | 5749174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3942698 |
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| End bp | 3946312 |
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| Gene Length | 3615 bp |
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| Protein Length | 1204 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298691 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_001564609 |
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| Protein GI | 160899027 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0968509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0336538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCGCG GTATCATTCC GAGCTTCCCT GTTGTTCCCC CACGTCCTCA TTCGTCCGTT
CGCCGCGGAC CGCCATCTGC CTGCATCGTG CGCCTGAATT CCATCAAGCT GTCCGGCTTC
AAGTCCTTCG CCGAGCCCAC CAACTTCATG CTGCCGGGGC AACTGGTGGG CGTGGTGGGC
CCCAACGGCT GCGGCAAGTC CAACATCATG GATGCGGTGC GCTGGGTGCT GGGCGAGAGC
AAGGCCAGCG AGCTGCGCGG CGAGTCCATG CAGGACGTGA TCTTCAACGG CACCACGCAC
CGCAAGCCGG CCAGCCGCTC CAGCGTGGAA CTGGTGTTCG ACAACAGTGA CCACCGCGCG
GGCGGCCAGT GGGGCCAGTT CGGCGAGATC GCCGTCAAGC GCGTGCTCAC GCGCGAGGGC
AACAGCAGCT ACTTCATCAA CAACCAGGCC GTGCGCCGCC GCGATGTGCA GGACGTGTTC
CTGGGCACGG GCCTGGGCCC GCGCGCCTAC GCCATCATCG GCCAGGGCAC GATCAGCCGC
ATCATCGAGT CGCGCCCCGA GGAACTGCGC CTGTTCCTGG AAGAGGCCGC AGGCGTGTCC
AAGTACAAGG AGCGCCGGCG CGAGACCGAG AACCGGCTCT CGGCCACCAC CGAGAACCTC
ACGCGCGTGG AAGACATCCT GCGCGAGCTC AACAACAACC TCGACCGGCT GGAAAAGCAG
GCCGAGGTGG CGGCCCAGTA CAACGCGCTG CAGTCCCAGG TCACGCTCAA GCAGCAGCAG
CTGTGGTTCC TCAAGCGCGC CGAGGCCGAG GCCGAGCAGG ACCGCGTGCG CGTGGAGGGC
CTGCAGGCCG TCAACGAGCT CGAAGAGCGC ATGGCCGACA TCCGCAACAA CGAAAGCGGA
CTCGAAACCC TGCGCCAGGC CCACTACGAC GCCAGCGATC AGGTCAACCA GGCCCAGGCC
AAGCTCTACG AATCCACGGC CGAAGTCGGC AAGCTGGAGG CCGAGATCCG CTACGTGCTC
GAAGGCCGCC AGCGCGTGCA GCAGCGGCTG CAGCAGCTGT CCGAGCAGGT GCTGCTGTGG
AACAGCCGCC GCGAGGAAGC CGAAGCCGAG ATCGAGAACC TCGAAGGCGC CGGCATGGAC
GCCGAGGAAC AGGCCGAGAT GCTGGCCGCC CAGGTCGAGG AGCAAAGCAT GCGCCTGCCC
GACCTGGAGG ACGCCCTGCG CAATGCCCAG AAGGCCGACA CCGACCAGCG CGCCAGCGTG
GTCCAGGTGC AGCAGCAGAT CCAGGTGCTG GCCGCCGAGC AGCGCAGCCT GGACGAGCAG
CGCCGCCAGT TCGAGACCCG CTTCGAGCGC CTGCGCGCCG ACCGCAACGC GCTGGAGACG
CCCGACGAGG CCCGCCTGAA CAATCTGCAG TCCCAGCTGC AAGAGGCGCG CGAACTGGCT
GAAATGGCCG ATGCCGTGCT CAACGAGCTG CAGGACTCCG TGCCCCAGCT CGACGAGGAC
CGCCGCACGC GCCAGCAGGC CGTCAATGCC GAGGCCGCGC GCCACGCGGA CCTGTCGGCG
CGGCTGGAAG CGCTCAAGGC CCTGCAGGAA AAGGTCAAGA CAGACGGCAA GCTCCAGCCC
TGGCTGGCCA AGCACGGCCT GGACGGCATG CAGGGCCTGT GGAGCCGCAT TGCCATTGAG
CCCGGCTGGG AAAACGCGCT GGAGGCCGCG CTGCGCGAGC GCCTGGGCGC GCTGGAAGTG
GGCCGGCTCG ACATGGTGCG TGGCTTTCTG GGCTCAGGCG GGCACGATGC GCCGCCCGCG
CGCCTGGCCT TCTTCAGCCC GCCGCAGGGC GCACCCGCGC CGGCCGCCGG CCGCTGGCAG
CACCTGTCGG ACCTGCTGCG CGTGAACGAT GCCGGCCTGC GCGCCGTGCT CGGCGACTGG
CTGCAGGACT GCTACACGGC GCCCACTCTG GAAGAGGCGC TGTCGCGTCG CAGCGAACTG
CGGCCCGGTG AAACCGTCTA CGTGCCCACG GGCCATGCCG TCAGCAGCCA CAGCGTGAGC
TTTTATGCGC AGGACTCGGA GCAATCCGGC CTGCTGGCCC GCGCCCAGGA AATAGAGCAC
CTTGAAAAGG AAGTGCGCGC CCAGGCGCTG ATTTCCGATG AATCACGCAC GGCCCTGGTG
CGTGCCGAAA GCGCCTATGC CGAGGCCTCG CAGCGCCTGG TCAGCGCCCG GCGCGAGGCC
AGCGAATCGC AAAGCCGTGC CCACGAGCTG CAGGTCGAGA CGCTGCGCCT GTCGCAGCTG
GCCGAGCAGG CCCGCGCGCG CAATGCCCAG ATCAGCGCCG ACCTGGCCGA GGTCGAGGCC
CAGCTGTCCG ACATCGAGGA GCGCCGCGTG GCGGCCGAGG CCCGCTTCGA GGAACTGGAC
ATGCAACTGG CCGACAGCCA GGAGCGCCAT GCCCAGCTCG GCGACAAGGT GCTGGAGTCC
GAGCGGCGCC TGAACGAATC GCGCGAGCAG CTGCGCACGC TGGAACGCCA GGCCCAGGAG
GCCACGTTCT CGCGCCGCAG CCTGGAAGCG CGCCGGGGCG AACTCAGCCG CACCATAGAG
ACGGCCAGCC AGCAGGCCCG CTCGCTGGCC GACGAGCAGC AGCGCGCGCA GGACGAGCTC
ACGCGCCTGA CCGATGCCGC GGCCCAGGGC GGCCTGCAGG ATGCGCTGGA TTTGAAGATG
CAGCGCGAGC AGGCCGTGGC CGCGCGCCGC AGCGAATATG ACGACCTGAC CAACAAGCTG
CGCGCCAGCG ACGAACGCCG CCAGCAACTG GAAAAGGCGC TGGACCCGCT GCGCCAGCGC
ATCACCGAAT TCCAGCTCAA GGAGCAGGCC GCGCGCCTGG GCCTGGAGCA GTACTCCACC
TTGCTGGAAG AGGCGGGCGC CGACCTGGCC GCCGTCTCCC AGTCCATTGC CGAGGCCAAT
GTGCGCATGC ACGGCCTGCA GGGCGAGATC GACCGCCTGC ACCGCGAGAT CGCGGCCCTG
GGCGCGGTCA ACCTGGCGGC GCTGGACGAG CTGAAGCTGG CGCGCGAGCG CAAGACCTTC
CTCGACGCGC AGACCGAGGA CCTGACCCAG GCCATGAACA CGCTGGAAGA TGCCATCCGC
AAGATCGATG CCGAGACGCG CGAGCTGCTG TCGGGCACCT TCGAGACCGT GAACGGGCAT
TTCGGGCGCA TGTTCCCCGA GCTGTTCGGC GGCGGGCAGG CCAAGCTGGT CATCACGGGC
GATGAAATCC TGGACTCGGG CGTGCAGGTG ATCGCGCAGC CGCCCGGCAA GAAGAACCAG
ACGATTCACC TGCTGTCGGG TGGCGAGAAG GCGCTGACCG CGATTGCCCT GGTCTTCGCC
ATCTTCCAGC TCAACCCGGC CCCGTTCTGT CTGCTGGACG AGGTGGACGC GCCGCTGGAC
GACGCCAACA CCGAGCGCTA TGCCAAGCTG GTGGCCAGCA TGAGCAAGAG CACGCAGTTC
CTGTTCATCA GCCACAACAA GATCGCCATG GAAATGGCCC AGCAGCTCAT CGGCGTGACC
ATGCAGGAGC AGGGCGTGTC CCGCATCGTG GCCGTGGACA TGGAGTCCGC GCTGTCCATG
GCTGAGCTAT CCTGA
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| Protein sequence | MARGIIPSFP VVPPRPHSSV RRGPPSACIV RLNSIKLSGF KSFAEPTNFM LPGQLVGVVG
PNGCGKSNIM DAVRWVLGES KASELRGESM QDVIFNGTTH RKPASRSSVE LVFDNSDHRA
GGQWGQFGEI AVKRVLTREG NSSYFINNQA VRRRDVQDVF LGTGLGPRAY AIIGQGTISR
IIESRPEELR LFLEEAAGVS KYKERRRETE NRLSATTENL TRVEDILREL NNNLDRLEKQ
AEVAAQYNAL QSQVTLKQQQ LWFLKRAEAE AEQDRVRVEG LQAVNELEER MADIRNNESG
LETLRQAHYD ASDQVNQAQA KLYESTAEVG KLEAEIRYVL EGRQRVQQRL QQLSEQVLLW
NSRREEAEAE IENLEGAGMD AEEQAEMLAA QVEEQSMRLP DLEDALRNAQ KADTDQRASV
VQVQQQIQVL AAEQRSLDEQ RRQFETRFER LRADRNALET PDEARLNNLQ SQLQEARELA
EMADAVLNEL QDSVPQLDED RRTRQQAVNA EAARHADLSA RLEALKALQE KVKTDGKLQP
WLAKHGLDGM QGLWSRIAIE PGWENALEAA LRERLGALEV GRLDMVRGFL GSGGHDAPPA
RLAFFSPPQG APAPAAGRWQ HLSDLLRVND AGLRAVLGDW LQDCYTAPTL EEALSRRSEL
RPGETVYVPT GHAVSSHSVS FYAQDSEQSG LLARAQEIEH LEKEVRAQAL ISDESRTALV
RAESAYAEAS QRLVSARREA SESQSRAHEL QVETLRLSQL AEQARARNAQ ISADLAEVEA
QLSDIEERRV AAEARFEELD MQLADSQERH AQLGDKVLES ERRLNESREQ LRTLERQAQE
ATFSRRSLEA RRGELSRTIE TASQQARSLA DEQQRAQDEL TRLTDAAAQG GLQDALDLKM
QREQAVAARR SEYDDLTNKL RASDERRQQL EKALDPLRQR ITEFQLKEQA ARLGLEQYST
LLEEAGADLA AVSQSIAEAN VRMHGLQGEI DRLHREIAAL GAVNLAALDE LKLARERKTF
LDAQTEDLTQ AMNTLEDAIR KIDAETRELL SGTFETVNGH FGRMFPELFG GGQAKLVITG
DEILDSGVQV IAQPPGKKNQ TIHLLSGGEK ALTAIALVFA IFQLNPAPFC LLDEVDAPLD
DANTERYAKL VASMSKSTQF LFISHNKIAM EMAQQLIGVT MQEQGVSRIV AVDMESALSM
AELS
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