| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3587 |
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| Symbol | |
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| ID | 5749171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3935155 |
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| End bp | 3937782 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298688 |
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| Product | aconitate hydratase |
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| Protein accession | YP_001564606 |
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| Protein GI | 160899024 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00350966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGTCCC GCTACAAGAA ACCCCTGCCC GGCACCACGC TGCACTACAT CGACGCCCGC
GCCGCCGTCG ATGCCCTCTC GCCCGGCGCC TGGGCACGCC TGCCCTACAC CGCCCGCGTC
CACGCCGAGA ACCTTGTGCG CCGCGCCGAT CCCGCGCAGC TGGACAGCTA CCTGCTGCAG
CTCATCGAGC GCCGCCGCGA CATCGACTTT CCCTGGTACC CCGTGCGCGT GGTCTGCCAC
GACATCCTGG GCCAGACCGC CCTGGTGGAC CTGGCCGGCC TGCGCGACGC CATTGCGGCC
GAAGGCGGCG ACCCCGCCCA GGTCAACCCC GTCGTTCCCG TGCAGCTCAT CGTGGACCAT
TCGCTGGCCG TGGAGTGCGG CGGCTTCGAT CCCGACGCCT TCGTGAAGAA CCGCGCCATC
GAGGACCGCC GCAACGAGGA CCGCTTCCAC TTCATCGAGT GGACAAAAAA AGCCTTTGCC
AACGTGGATG TGATCCCCGC AGGGAACGGG ATCATGCACC AGATCAATCT GGAAAAAATG
TCCCCCGTGG TGACCGTGCA GGATGGCCTG GCCTTCCCCG ATACCTGCGT GGGCACGGAC
AGTCACACGC CCCATGTCGA TGCCCTGGGC GTGATCGCCG TGGGCGTGGG TGGCCTTGAG
GCCGAGAACG TCATGCTGGG CCGCGCCTGC TGGATGCGCC TGCCCGAGAT CGTGGGCGTG
CGCCTCACGG GCCGGCGCCA GGGCGGCATC ACCGCCACCG ACATCGTGCT GGCCCTGACC
GAATTCCTGC GCCAGCAAAA AGTTGTCGGC GCCTATGTGG AATTCTTTGG CGAGGGCGCC
GACAGCCTGA GCATTGGCGA CCGCGCCACC ATCTCCAACA TGTGCCCTGA ATACGGCGCC
ACGGCGGCCA TGTTCTCCAT TGACGACCAG ACCCTGGCCT ACCTGCGCCT GACCGGCCGC
GACGAGGCCC AGGTGCGCCT GGTCGAGGCC TATGCGCGCA CCGCGGGTTT CTGGAGCGAC
AGCCTGGCCG ATGCCCAGTA CGAGCGCGTG CTGCAGTTCG ACCTGTCCAC CGTGGTGCGC
AACATGGCCG GCCCCTCGAA TCCGCACCGG CGCCTGCCCA CCTCGGCCCT GGCCGAGCGC
GGCATTGCCG ATGCGGCCAA GCTGCAGGCC GCCCGCGCCC AGGAGGCGGA AGGCCTGATG
CCCGATGGGG CCGTCATCAT CGCCGCCATC ACCAGCTGCA CCAACACCAG CAACCCGCGC
AACGTCATCG CCGCGGCGCT GCTGGCGCGC AATGCCAATC GCCTGGGTCT CACGCGCAAG
CCCTGGGTCA AGACCTCGCT GGCGCCGGGC TCCAAGGCCG TGGAGCTGTA TCTGAAGGAG
GCCGGGCTGC TCACCGAGCT GGAGCAACTG GGCTTTGGCA TCGTCGCCTT TGCCTGCACC
ACCTGCAACG GCATGAGCGG CGCGCTGGAC CCCGCCATCC AGCAGGAAAT CATCGAGCGC
GACCTCTACG CCACGGCCGT GCTCTCGGGC AACCGCAACT TCGACGGGCG CATCCATCCC
CAGGCCAAAC AAGCCTTCCT GGCCTCGCCG CCGCTGGTCG TGGCCTATGC GCTGGCGGGC
ACGGTGCGCT TTGACATCGA GCAGGATGTG CTGGCTGTGG TGGACGGCCG CGAGATCCAC
CTCAAGGACC TGTGGCCCGC CGACGAGGAG ATCGACGCCA TCGTCAAGCA ATCGGTCAAA
CCTGCGCAAT TCCGCGCCGT CTACGAACCC ATGTTCGCCC TCCGCAAGGA CGATGGAGAC
CGGGCACGGC CCCAGTACGA CTGGCGCCCC CAGTCCACCT ACATCCGCCG CCCCCCGTAC
TGGGACACCG AAGGCGTGGG CGCGCTGGCG GCCTTCCCGC GCACGCTGCG CAACATGCGG
CCGCTGGCCC TGCTGCCCGA CAACATCACC ACCGACCACC TGTCGCCCTC CAACGCCATC
CTGGCCGACA GCGCCGCGGG CGAATACCTG GCGCGCATGG GCCTGCCCGA GGAGGACTTC
AACTCCTACG CCACCCACCG CGGCGACCAC CTCACCGCCA TGCGGGCCAC CTTTGCCAAC
CCGCAGCTGG TCAATGAAAT GGCCGTCATC GACGGCGTGC AGCACAAGGG CTCGCTGGCG
CGCATCGAGC CCGAAGGCCG CGTGGAGCGC ATGTGGGAGG CCATGGAAAC CTACCTGAAC
CGCCGCCAGC CGCTGATCAT CATCGCGGGC GCCGACTACG GCCAGGGCTC CAGCCGCGAC
TGGGCGGCCA AGGGAGTGCG GCTGGCCGGA GTCGAGGCCG TGGTGGCCGA AGGCTTCGAG
CGCATCCACC GCACCAACCT CATCGGCATG GGCGTGCTGC CGCTGCAGTT CGTGCCGGGC
ACCGACCGCA GGACCCTGGG GCTGGACGGC ACGGAGATCT ATGGCGTGGA GGGCGAGCGC
ACGCCGGGAA CCCAACTCAC TCTGGTGATT GAACGAAGAA GCGGCCAGAC GCTGCGCGTG
CCGGTGACCT GCCGGCTGGA CACGGCCGAG GAGGTATCGG TCTACGAAGC GGGCGGCGTG
CTGCAGCGGT TTGCCCAGGA CTTTCTTGCA CAGACACAGG ACGCTTGA
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| Protein sequence | MTSRYKKPLP GTTLHYIDAR AAVDALSPGA WARLPYTARV HAENLVRRAD PAQLDSYLLQ
LIERRRDIDF PWYPVRVVCH DILGQTALVD LAGLRDAIAA EGGDPAQVNP VVPVQLIVDH
SLAVECGGFD PDAFVKNRAI EDRRNEDRFH FIEWTKKAFA NVDVIPAGNG IMHQINLEKM
SPVVTVQDGL AFPDTCVGTD SHTPHVDALG VIAVGVGGLE AENVMLGRAC WMRLPEIVGV
RLTGRRQGGI TATDIVLALT EFLRQQKVVG AYVEFFGEGA DSLSIGDRAT ISNMCPEYGA
TAAMFSIDDQ TLAYLRLTGR DEAQVRLVEA YARTAGFWSD SLADAQYERV LQFDLSTVVR
NMAGPSNPHR RLPTSALAER GIADAAKLQA ARAQEAEGLM PDGAVIIAAI TSCTNTSNPR
NVIAAALLAR NANRLGLTRK PWVKTSLAPG SKAVELYLKE AGLLTELEQL GFGIVAFACT
TCNGMSGALD PAIQQEIIER DLYATAVLSG NRNFDGRIHP QAKQAFLASP PLVVAYALAG
TVRFDIEQDV LAVVDGREIH LKDLWPADEE IDAIVKQSVK PAQFRAVYEP MFALRKDDGD
RARPQYDWRP QSTYIRRPPY WDTEGVGALA AFPRTLRNMR PLALLPDNIT TDHLSPSNAI
LADSAAGEYL ARMGLPEEDF NSYATHRGDH LTAMRATFAN PQLVNEMAVI DGVQHKGSLA
RIEPEGRVER MWEAMETYLN RRQPLIIIAG ADYGQGSSRD WAAKGVRLAG VEAVVAEGFE
RIHRTNLIGM GVLPLQFVPG TDRRTLGLDG TEIYGVEGER TPGTQLTLVI ERRSGQTLRV
PVTCRLDTAE EVSVYEAGGV LQRFAQDFLA QTQDA
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