Gene Daci_3581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3581 
Symbol 
ID5749165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3927756 
End bp3928751 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content68% 
IMG OID641298682 
Producthypothetical protein 
Protein accessionYP_001564600 
Protein GI160899018 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0733859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0164081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAGC CATCCCGCCT GCCCCGCCGC ACCGCCCTGG CCGCCCTGCT TGCCACCGTG 
CTGCCGCTGG CCGGCGTGTC GTTTGCCGCG CCTGCCGCCG ATGCCTGGCC CACCCGCCCC
ATCCGCCTGG TGGTGCCGTT CTCTGCAGGC GGCGCCAACG ACCTGATGGC CCGCTCGGCC
GCCGAAGGTG CGTCGAAAAT CCTGGGCCAG CCGGTGGTCA TCGACAACCG GCCCGGCGCA
GGCGGCACCG TGGGCGCCGA CATCGTGGCC AAGGCCCAGC CCGATGGCTA CACCCTGCTG
GTGAGCGCAG CCGGCGTGAT CTCCAACAGC ATGATCAAGA AGACCATGCC GTTCAAGGAC
GATGCGCTGG TGCCCGTGGC CATGATCGGA CTGGCGCCTT CGGTGATCGT GGTTCCCAAG
AACGCGCCCT ACCAGAACCT GCGAGATTTC GTCGAGGCAT CGAAGAAGGG CCAGGGCTTC
AATTTCGCCA CGGCCGGCAC GGGCAGCACG CCGCATTTCG TGGCGGAGAT GCTGAACGTG
AAGTACGGCG CACAGCTGCA GCCCGTGCCC TACAAGAGCG GATCGGAAAG CACGACGGCC
GTGCTGGGCG GCCAGGTGGA GGGAACGTCG GAGGCCAGCA TCATCGCCCT GCCCCACATC
CTCAATGAGG GCAAGTTCAA GGCCCTGGCC ACGACCTGGA CGCAGCGCAT CTCCGCCTAT
CCGCAGCTGT CCACCGCCGT GGAGCAGGGC TTTGCCGAAC TGCAGATCGC GCACTGGGCC
GGCATCCATG CGCCCAAGGG AACGCCGCCC GCCATCCTGG ACAAGCTGGC CGCCGCCGTG
GACCAGGCCA TGAAGGAGCC GGCGACCGTG GAGAAGCTCA AGGGCCTGGG CATCGAGCCC
ATCGGCGGCA CGCGCGCCGA GTTCGTGAAA TTCACCGATG CCGAGCGCAA GCGCCTGGGC
GAGATCGTCA AGGCCGCGAA GATGCAGGAA AAGTGA
 
Protein sequence
MHQPSRLPRR TALAALLATV LPLAGVSFAA PAADAWPTRP IRLVVPFSAG GANDLMARSA 
AEGASKILGQ PVVIDNRPGA GGTVGADIVA KAQPDGYTLL VSAAGVISNS MIKKTMPFKD
DALVPVAMIG LAPSVIVVPK NAPYQNLRDF VEASKKGQGF NFATAGTGST PHFVAEMLNV
KYGAQLQPVP YKSGSESTTA VLGGQVEGTS EASIIALPHI LNEGKFKALA TTWTQRISAY
PQLSTAVEQG FAELQIAHWA GIHAPKGTPP AILDKLAAAV DQAMKEPATV EKLKGLGIEP
IGGTRAEFVK FTDAERKRLG EIVKAAKMQE K