Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3580 |
Symbol | |
ID | 5749164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3926701 |
End bp | 3927711 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641298681 |
Product | hypothetical protein |
Protein accession | YP_001564599 |
Protein GI | 160899017 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.082795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0103715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCC GCCGCAATAC CCTCCGCCTG AGCTTGGGGC TGGCCCTGAG CGCCACCGCC GCCGCTGCGG CCCTGCTCGC CGCCCCCGCC ACCGCCGTGG CCCAGGGCGC AGATGCCTGG CCCTCGCGCC CCATCAAGCT CATCGTGCCC TATGCGGCCG GCGGCTTTGC CGATACGCGG GCCCGCAAGA TCGCCGACAA GATAGGCCAG AGCCTGGGCC AGCCCATCGT GATCGACAAC CGCGGCGGCG CGGGCGGCGT GACGGGCACG GATGCCATTG CCAAGGCCAC GGACGGCCAT ACCTTCGGCT TCGGCTCGCC AGGCCCGCTG GTGACCAATC CCATGCTGAT GAAAAAGCTG CCCTACAACG CCGCCCGCGA CCTGCAGCCC ATCATCCTGA TCGAAGAGGC GCCGCTGATC CTGACCACGG CGCCCAACCA GCCGTTCAAG ACCGTGGCCG AGCTGGTGGC TGCAGCCAAG GCCAAGCCGG GCACGCTGAC CTATGGATCG TCGGGCGTGG GCGGTGCCCA CCACCTGTCG GGCGAGCTGC TGGCCTTCCA GACGCGCACG GACATGGTCC ATGTGCCCTA CAAGGGCGGC GCGCTGGCAG CCACCGACCT GATGGGCGGG CACCTGGCCT TCATGTTCGA GATGGGCTAT GCGGCCCTGC CCGCCATCCA GGGCGACAAG GTCAAGGCGC TGGCCGTGTC CAGCAAGCAG CGACTGAAGG TGCTGCCCAG CGTGCCCACG CTGGATGAGG CGGGCATCAA GGGCTTCGAG TCGTACAACT GGCTGGGCAT GATCGCGCCG GCCAGCACGC CGCCGGCCGT GATCGAGCGC CTGAACAAGG CCGTGAACGA GGCACTCAAG GACGCCGAGG TGCGCGCCAT GATCGAGAAC ACGGGCGGCA TGGTCATGGG CGGCACGCCC CAGGCCTACG GCAAGTTCAT CGAGGCCGAG CGCGCCAAGT GGGGCCCGGT GATCAAGAAC GCCAACATCA CGCTGGACTG A
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Protein sequence | MNTRRNTLRL SLGLALSATA AAAALLAAPA TAVAQGADAW PSRPIKLIVP YAAGGFADTR ARKIADKIGQ SLGQPIVIDN RGGAGGVTGT DAIAKATDGH TFGFGSPGPL VTNPMLMKKL PYNAARDLQP IILIEEAPLI LTTAPNQPFK TVAELVAAAK AKPGTLTYGS SGVGGAHHLS GELLAFQTRT DMVHVPYKGG ALAATDLMGG HLAFMFEMGY AALPAIQGDK VKALAVSSKQ RLKVLPSVPT LDEAGIKGFE SYNWLGMIAP ASTPPAVIER LNKAVNEALK DAEVRAMIEN TGGMVMGGTP QAYGKFIEAE RAKWGPVIKN ANITLD
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