Gene Daci_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3577 
Symbol 
ID5749161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3923804 
End bp3925024 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content71% 
IMG OID641298678 
Productmajor facilitator transporter 
Protein accessionYP_001564596 
Protein GI160899014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.194075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0346233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCACG CCTACCGCCA GCTGTTCACC CGGCCCGGCA CGGCCGCCTT TGTGCTGGCC 
GGTCTCCTGG CCCGCCTGCC CCTGTCGATG ACGGGCATCG GCCTGATCAC CATGCTGTCC
CAGCAGCGCG GCGCCTACAC GCTGGCCGGC GCGGTCGCTG CCTGCTTTGC GCTGTCCATT
GCGGTGCTGG CCCCGCGCAT CTCGGCCCTG GTGGACCGCC ATGGCCAGCG CAAGGTGCTG
CCCTGGGCAG CGGCCGTGAG TGCTGCCGCC ATGTTCGCGC TGCTGGCCTG CGCGCATTGG
CAGGGACCGG ATTGGCTGCT GTTGGTGCTG GCAGCGCTGG TGGGCGCCCT GCCCAGCATG
CCGGCCATGG TGCGCGCGCG CTGGACCGTG CTGCTGCGTG GCACGCCCCA GCTGCAGACG
GCCTATGCGC TGGAGGCCGT GCTGGACGAT GTCTGCTTCA TCGTCGGCCC GCCGCTGTCG
GTGGGCCTGA GCATGGTGCT GTTCCCCGAG GCCGGGCCGC TGGCCGCCTC CTTGCTGCTG
CTGGTGGGTG TGGCGCTGTT CGTGGCCCAG CGCCGCACAG AGCCGCCCGT GGACACATCG
CAGCAGCGCA CGCGCCAGCA GTCGCTGGCC CGCCATCCCG TGGTGCGCAC GCTGGCGCTG
TTCATGCTGG CCCAGGGCAT CATCGTGGGC ACCATCGACG TGGCCAGCGT GGCCTTTGCC
ACGCAGCAGG GCCAGCCGGC GGCGGCCAGC ATCGTGCTCT CGTTCTACGC GCTGGGGTCC
TGCGTGATGG GACTGGTCTT CGGCACGCTG CGCCTGAAGG CGCCGCTGCA CCGCCAGATT
GCCTGGGTGG GCGCCTCGGT GTGCATCACC GCCGTGCCCC TGCTGCTGGC CACCAATGTG
TTCACGCTGA CCCTGGCCGT GTTGCTGGCC GGCATTACCT TCGGGCCGAC CATCACCGTA
GCCATGGGCC TGGTGGAGCA GCAGGTGCCG CACCAGCGCC TGACCGAAGG CATGACCTGG
CTGCTGACCG GCATTGCCAT GGGCGTGGCC CTGGGTGCGG CCGCCGCAGG CTGGGCCACC
GACCTGTGGG GCGCGCGCAT TTCCTTCGTG GTGGCGCTGC TGGCCGGTGT CGCCATGTGG
GCCCTGGGCG TGCTGGCCGC ACGCCAGGCA CGAGCGAAAG AGAGCCCGCC TGCCGAAGAC
GCAGCCGCCG CCTGCACCTG A
 
Protein sequence
MFHAYRQLFT RPGTAAFVLA GLLARLPLSM TGIGLITMLS QQRGAYTLAG AVAACFALSI 
AVLAPRISAL VDRHGQRKVL PWAAAVSAAA MFALLACAHW QGPDWLLLVL AALVGALPSM
PAMVRARWTV LLRGTPQLQT AYALEAVLDD VCFIVGPPLS VGLSMVLFPE AGPLAASLLL
LVGVALFVAQ RRTEPPVDTS QQRTRQQSLA RHPVVRTLAL FMLAQGIIVG TIDVASVAFA
TQQGQPAAAS IVLSFYALGS CVMGLVFGTL RLKAPLHRQI AWVGASVCIT AVPLLLATNV
FTLTLAVLLA GITFGPTITV AMGLVEQQVP HQRLTEGMTW LLTGIAMGVA LGAAAAGWAT
DLWGARISFV VALLAGVAMW ALGVLAARQA RAKESPPAED AAAACT