Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3575 |
Symbol | |
ID | 5749159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3921229 |
End bp | 3922773 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641298676 |
Product | major facilitator transporter |
Protein accession | YP_001564594 |
Protein GI | 160899012 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.211947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0378977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTCA CAACGCAAAC CCAGAACCCC GTTTCGGGGC ATCTTCCAAA ATCCCAGTCG GCCGATCCGC GCCGCTGGCT GGTGCTGGCC ATCGTCTCGG TGGCGCTGCT GCTCATCGTC ATCGACATGA CGGTGCTCTA CACGGCGCTT CCGCGCCTGA CGCATGACCT GGCGGCCACG GCCTCGGCCA AGCTGTGGAT CGTCAACATC TACGCGCTGG TGGTCTCCGG CCTGCTGCTG GGCATGGGCA CGCTGGGCGA CAGGCTCGGC CACAAGCGGC TGTTCATGGC CGGGCTGTGC GTGTTCGGCG TGGCATCGCT GTGCGCGGCC TTTGCGCCCT CGCCCGCCTT GCTGATTGCA GCGCGTGCGC TGCTGGGCGT GGGCGCGGCC ATGATGATGC CGGCCACGCT GTCCCTGATC CGCCTGAGCT TTGCCGATGA GCGCGAGCGC GCGCTGGCCA TCGGCATCTG GGCCTCGGTG GCCTCGGGCG GTGCGGCCTT CGGGCCGGTG GTGAGCGGGC TGCTGCTCGA ATACTTCTGG TGGGGCTCGG TGTTCCTGAT CAATGTGCCC ATCGTGCTGC TCGCCCTGCC CCTGGCCGGC TGGCTGATTC CCGCAGGCAC GGCCACCTCG CAGCGGCCCT GGGACTTCAT CGGCTCGTTG CAGGTCATGG CAGGCCTGGT GGGCAGCACC TACGCCATCA AGGAAGCCGG CAAACAGTCG CCCGACTGGG CCCTGGCCGC CGTGGCTCTG GTGCTGGGCC TGGGCTTTCT CGCGCTGTTC GTGCGGCGCC AGCGCCGCAG CAGCGACCCG CTGCTGGACT TCGCGCTGTT CCGCAACCCG GCGTTTGCCA CGGCCGTGGC CTCGGCCCTG GTGGCAGCGG CCGCGCTGAT CGGCATGGAG CTCGTGTTCA GCCAGCGCCT GCAACTGGTG CAGGGACTGT CGCCACTGCA GGCCGGCCTG GCCGTGCTGC CGCTGCCGCT GGCCGCCTTT GTCGCAGGCC CCGTGGCAGG CAACTGGCTG CCACGGCTGG GCGGCGCGCG CATGCTGCCG GCAGCGCTGC TGCTGTCGAG CCTGGGCATG GGCGGCTATC TGCTGGTCCA CGACATGGGC TGGTGGCCAC AGGCGGCAGC GCTGGCCGTG CTGGGCCTGG GCATAGGCGC GGCCATGACC ACGGCGTCGA GCACCATCAT GCAAAGCGCT CCCGCGGACC GTGCCGGCAT GGCGGCCTCG GTCGAGGAGG TGTCCTACGA GCTGGGCGGC GCCCTGGGCG TGACGCTGAT GGGCAGCCTG CTGTCGGCCG TCTATGCAGG CTCATTGCGC CTGCCGGAGG GCCTGGGCCT GGCCCTGCCC GCTTCCGTGC GCGACAGCCT GGACGAAGCC CTGCTGGCTG CCGATCAGCT GATGCCTCAG GCCGCGCACC AGTTGACCGA GCTGGCACGC ACGGCCTTCG GCCAGGGCTT CAGCGCCGTG ATCGCCAGCG CCACGCTGCT GCTGGTCTGC ACGGCACTGT GGACGGGCTG GCGGCTGCGC GGTCCGCGCC GCTGA
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Protein sequence | MAFTTQTQNP VSGHLPKSQS ADPRRWLVLA IVSVALLLIV IDMTVLYTAL PRLTHDLAAT ASAKLWIVNI YALVVSGLLL GMGTLGDRLG HKRLFMAGLC VFGVASLCAA FAPSPALLIA ARALLGVGAA MMMPATLSLI RLSFADERER ALAIGIWASV ASGGAAFGPV VSGLLLEYFW WGSVFLINVP IVLLALPLAG WLIPAGTATS QRPWDFIGSL QVMAGLVGST YAIKEAGKQS PDWALAAVAL VLGLGFLALF VRRQRRSSDP LLDFALFRNP AFATAVASAL VAAAALIGME LVFSQRLQLV QGLSPLQAGL AVLPLPLAAF VAGPVAGNWL PRLGGARMLP AALLLSSLGM GGYLLVHDMG WWPQAAALAV LGLGIGAAMT TASSTIMQSA PADRAGMAAS VEEVSYELGG ALGVTLMGSL LSAVYAGSLR LPEGLGLALP ASVRDSLDEA LLAADQLMPQ AAHQLTELAR TAFGQGFSAV IASATLLLVC TALWTGWRLR GPRR
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