| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3572 |
|---|
| Symbol | |
|---|
| ID | 5749156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3917871 |
|---|
| End bp | 3918503 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641298673 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_001564591 |
|---|
| Protein GI | 160899009 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0594941 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0034613 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TTGCTGTCGA TCATACAAGC CGCAGGCTGG CCGATCTGGC CACTGATTGC CTGCTCCATC
CTGGCTCTGG CCCTGGTCTT TGAACGTTTC GTGGCGCTGA AAACGGCCCG CGTGGCGCCG
CCCGCCCTGC TGGGCGAGGC GATTTCCGTG TCCTCGCGCG GCCTGCCCAG CCAGGAAGTC
GTGCAGCAGC TGTCCCAGAA CTCCACGCTG GGCGAAGTCC TGGCAAGCGG ACTGCGCGCC
CTGCAGGCTC ATCCGGACAG CAGCGAAGAA GAGCTTCGCG CCTCCATGGA AGGCGCCGGC
CGCGCTGCTG CCCACACCCT GGAAAAGCAC CTGAGCGCGC TGGCCACCAT CGCCTCTGCA
GCGCCTTTGC TGGGCCTGCT GGGCACGGTG ATCGGCATGA TCGAGATCTT CGGCTCGCAA
GGCGGCGCAT CGGCCACCGG CGGCGGCAAC CCGGCGCAGC TGGCGGCCGG CATCTCCATC
GCCCTGTACA ACACGGCCTT CGGCCTGATC GTCGCCATTC CGGCACTGAT CTTCTGGCGC
TACTTCCGCG CCCGCGTCGA TGGCTACCTG CTGGGCATGG AGCTGGCTTC CGAGCAGTTC
GTGCGCCACC TGGTGCGCGT CGGCGGCAAG TGA
|
|---|
| Protein sequence | MLSIIQAAGW PIWPLIACSI LALALVFERF VALKTARVAP PALLGEAISV SSRGLPSQEV
VQQLSQNSTL GEVLASGLRA LQAHPDSSEE ELRASMEGAG RAAAHTLEKH LSALATIASA
APLLGLLGTV IGMIEIFGSQ GGASATGGGN PAQLAAGISI ALYNTAFGLI VAIPALIFWR
YFRARVDGYL LGMELASEQF VRHLVRVGGK
|
|---|
| |