| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3565 |
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| Symbol | |
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| ID | 5749149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3912514 |
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| End bp | 3913188 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298666 |
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| Product | LexA repressor |
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| Protein accession | YP_001564584 |
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| Protein GI | 160899002 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000173958 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00714221 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTCGACC ATCCCAAGCT CACCGCCCGC CAGCAACAGA TCCTGGACCT GATCCAGGCC
GCCATCTCCC GCACGGGCGC GCCTCCCACC CGCGCGGAAA TCGCCAACAC GCTGGGCTTC
AAGTCCGCCA ACGCTGCCGA GGAACACCTG CAGGCCCTGG CCCGCAAAGG TGTGATCGAA
CTGGTCAGCG GCACCTCGCG CGGCATTCGC CTGCGTACCG ACACCGTGCG CAACATCAAT
GCCGCGCGCG GCACCAGCTT CGGACTGCCG CTGTCGGCCC TGGCACCGCT GATGCTGCCC
CTGGTGGGCC GCGTTGCGGC GGGCTCGCCC ATTCTCGCGC AGGAACACAT CGACCAAACC
TATTCCGTCG AGCCCAGCCT GTTCCAGACG CGCCCCGACT ATCTGCTGCG CGTGCGCGGC
ATGTCCATGC GCGACGCGGG CATCATGGAC GGCGACCTGC TGGCCGTGCA GTCCGCACAC
GAAGCCCGCA ACGGCCAGAT CGTCGTGGCG CGCCTGGGTG ACGAAGTCAC CGTCAAGCGC
CTGCGCCGCA CCACGCAGGG CGTGGAACTT CTGCCGGAGA ACCCCGATTA CCCGGTGATC
CGCGTCGCCC CCGAAGAGGC CTTTGCCATT GAAGGCCTGG CCGTGGGGCT GATCCGCAAC
AGCATGTCCA TGTAA
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| Protein sequence | MLDHPKLTAR QQQILDLIQA AISRTGAPPT RAEIANTLGF KSANAAEEHL QALARKGVIE
LVSGTSRGIR LRTDTVRNIN AARGTSFGLP LSALAPLMLP LVGRVAAGSP ILAQEHIDQT
YSVEPSLFQT RPDYLLRVRG MSMRDAGIMD GDLLAVQSAH EARNGQIVVA RLGDEVTVKR
LRRTTQGVEL LPENPDYPVI RVAPEEAFAI EGLAVGLIRN SMSM
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