Gene Daci_3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3544 
Symbol 
ID5749128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3894463 
End bp3894708 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content67% 
IMG OID641298645 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_001564563 
Protein GI160898981 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0989116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAA GCATCACCCT GAACTTTGCA CCTGCCGTGC TCGGCCGCGA GCATGCCGCA 
GCCTACGTGG CGCTGAGCGT CAGTTCCTTC GAACAACTGG TGCGTGAGCG CCAGATACCC
CAGCCACGCC AGCTGTCTGC CAGGCGCGTT GGCTGGCTGC GCGCCGAGCT CGATGACTGG
TCCGCCCGGC GGCCGGCATC CGAGCTGCTG CCACCGGAGA ACACCGGCGC CCCTAAGCCC
CGATGA
 
Protein sequence
MSKSITLNFA PAVLGREHAA AYVALSVSSF EQLVRERQIP QPRQLSARRV GWLRAELDDW 
SARRPASELL PPENTGAPKP R