Gene Daci_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3536 
Symbol 
ID5749121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3886393 
End bp3886806 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content71% 
IMG OID641298639 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_001564557 
Protein GI160898975 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0117443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACG ACACAACAGC GGCCGGCATT GCCGGCCTGA TCCTGCTGGC CCACGGCTCC 
CGCGACGCCC TGTGGCGCCA GCCCATCGAG GCCGTGCTCG GCGCCGTCCG GCAAACGCGG
CCCCACGGCC TGGCTGCATG CGCCTACCTG GAAGCCTGTG CGCCCGACCT GCCCACCGCC
GCGCGCGGGC TGGTCGAGGC GGGCGCCACG CACATCACCG TGCTGCCCCT GTTCCTGGGC
ACGGGCAAGC ATGCGCGTGA GGACATCCCG AAGCTGGTGC AGGAGATCCG CCACACCTAC
CCACAGGTGG CCGTGGAACT GGAGCCGGCC GTGGGCGAGC ATCCACGTGT CACGGCCCTG
CTGGCAGAGC TGGCGTTGGC GGCCATGGAG CCTTCCGGAA GGTCAGGAAG CTGA
 
Protein sequence
MQNDTTAAGI AGLILLAHGS RDALWRQPIE AVLGAVRQTR PHGLAACAYL EACAPDLPTA 
ARGLVEAGAT HITVLPLFLG TGKHAREDIP KLVQEIRHTY PQVAVELEPA VGEHPRVTAL
LAELALAAME PSGRSGS