Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3524 |
Symbol | |
ID | 5749109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3870659 |
End bp | 3871444 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641298627 |
Product | iojap-like protein |
Protein accession | YP_001564545 |
Protein GI | 160898963 |
COG category | [S] Function unknown |
COG ID | [COG0799] Uncharacterized homolog of plant Iojap protein |
TIGRFAM ID | [TIGR00090] iojap-like ribosome-associated protein |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.395947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0571508 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACTT CCACCAAATC GGATTCCGCA GCCAAGCGCG ACGTGACCAA GCTGCAACGC GCCATTGTTG ACGGCCTCGA AAACGTCAAG GCCCAAGACA TCCAGGTCTT CAATACCGAA AAGCTCTCGC CGCTGTTCGA GCGCGTGATC GTGGCTGCGG GCACCTCCAA CCGCCAGACC AAGGCGCTGG CCTCCAGCGT GCGCGACGCT GTCAAGCAGG CCGGTTTTCC CGTGCCACGC CAGGAAGGCG AAGAAAACGG CGAGTGGATC ATCGTGGACT GCGGCCAGGC CGTGGTCCAT GTCATGCAGC CAGCCATCCG CCAGTACTAC CGCCTGGAAG AGATCTGGGG CGAAACGCCT GTGCGCCTGA AGCTGGGTGC TCCCAAGCCC ACGCGCTCGG CCGCCACCGA CAAGGCCGAG GAAAAGGCCA AGAAGGCCGC TTCCAAGAAG GCTGCTGCAA CGGCCGCCAA GCCTGCTGCC AAGAAGGCCG CCTCTGCCGC CGCACCTGCT GCGGGCAAGA AGCCCGCTGC CAAGAAGGCA GCTCCTGCCA AGGCCACTGC ACCCCGTTCC GCAGCTGCCA AGCCGGCCGC ATCCCGTACG GCTGCTGCAA AGTCGGCCGC TCCCAAGTCC GCCGCCGTGA AGTCGGCCGC CGCCAAGGCT CCGGCCCGCA AGACGGCAGC GCCCAAGGCC ATCAAGACCG TGGTGGTCAA CCGCGCTCCC GCCAAGCCCA AGGCAGGTGC CGCTGCCAAG CCAGCCGCCA AGCGCGCTCC CCGCGCCAAG GCCTGA
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Protein sequence | MTTSTKSDSA AKRDVTKLQR AIVDGLENVK AQDIQVFNTE KLSPLFERVI VAAGTSNRQT KALASSVRDA VKQAGFPVPR QEGEENGEWI IVDCGQAVVH VMQPAIRQYY RLEEIWGETP VRLKLGAPKP TRSAATDKAE EKAKKAASKK AAATAAKPAA KKAASAAAPA AGKKPAAKKA APAKATAPRS AAAKPAASRT AAAKSAAPKS AAVKSAAAKA PARKTAAPKA IKTVVVNRAP AKPKAGAAAK PAAKRAPRAK A
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