| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3519 |
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| Symbol | |
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| ID | 5749104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3864611 |
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| End bp | 3865630 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298622 |
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| Product | pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_001564540 |
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| Protein GI | 160898958 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00283546 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.133146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAA GCGCCTCCAT CCACTTTGCG GAACCGCACG CCATGACGAC GAACAGCCCA
CCCTCGCTGC CCACCTATGA CGATGTCGCC GCCGCCGCCG GCCGGCTGGA AGGCGTGGCC
CACCGCACAC CCATACTGCG CAGCCGCACC GCCGACGAGC TGCTGGGCGC CCAGCTGTTC
TTCAAGTGCG AGAACCTGCA GCGCACGGGC GCCTTCAAGA TACGCGGCGC CTACAACGCG
CTGTCGCAGT TCACGCCCGA GCAGCGCAAG CGCGGCGCAC TGGCCTTCTC CTCGGGCAAC
CATGCCCAGG CCGTGGCACT GGCCGCGCAG ATGCTGGACA TGCCCGCGCT CATCGTCATG
CCCGAGGATG CCCCCGCCTC CAAGATGGCA GCCACGCGCT CCTACGGCGC CCAGGTGGTG
ACCTATGACC GCTTCACCGA GGACCGCGAG GCCATCTCCC GCCGCCTGGC CGACGAGCGC
GGCATGACAC TGATCCCGCC GTTCAACCAC CGCGACGTGA TCGCCGGCCA GGGCACGGCA
GCCAAGGAAC TGTTCGAAGA GGTGCCCGAC CTGGACTACC TCTTTGTCTG CCTGGGCGGC
GGCGGCCTGC TGTCGGGCAG CCTGCTGGCA GCCGGGCAAC TGGCGCCGCG CTGCAAGGTC
TACGGCGTCG AGCCCCAGGC CGGCGACGAT GCCCGCCAGT CGCTGCGCGC AGGCCAGATC
GTGCAGATCC CCACGCCCCA CACCATTGCC GACGGTGCCC AGACCCAGTC CATCGGCGAT
ATCACATTCG CCATCATCCG CGAGCATGTG GAAGATATCC TGGCTGTGGC GGACGAGCAT
CTGGTGCAGG CCATGCGCTT TTACGCGGAA CGCAAGAAAA TCGTGGTCGA ACCCACGGGA
GCGCTCTCGC TGGCGGGCGC CCTGCATGGC GGGGTTGCGC TGTCGGGAGC GCGCGTGGGC
ATTCTGATCA GCGGCGGCAA TGTGGACCTG GCGCGCTACG CACGCTTTCT GCACGACTGA
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| Protein sequence | MIESASIHFA EPHAMTTNSP PSLPTYDDVA AAAGRLEGVA HRTPILRSRT ADELLGAQLF
FKCENLQRTG AFKIRGAYNA LSQFTPEQRK RGALAFSSGN HAQAVALAAQ MLDMPALIVM
PEDAPASKMA ATRSYGAQVV TYDRFTEDRE AISRRLADER GMTLIPPFNH RDVIAGQGTA
AKELFEEVPD LDYLFVCLGG GGLLSGSLLA AGQLAPRCKV YGVEPQAGDD ARQSLRAGQI
VQIPTPHTIA DGAQTQSIGD ITFAIIREHV EDILAVADEH LVQAMRFYAE RKKIVVEPTG
ALSLAGALHG GVALSGARVG ILISGGNVDL ARYARFLHD
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