Gene Daci_3512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3512 
Symbol 
ID5749097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3858624 
End bp3859628 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content68% 
IMG OID641298615 
Producthypothetical protein 
Protein accessionYP_001564533 
Protein GI160898951 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.543672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.304228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTT CCCATTGCCG CGCGCGGCGC AGGCTGGTGG CGCTGGCCGC CACCACAACG 
GTGGCCACGC TGGCCGGGCT GGCTTCGCCG GGATTGATGG CGCAGGGCGC CTTCCCGTCC
AAGGCCATCA CCATGGTGGT TCCCTATCCG CCGGGTGGCT CCAACGACGT GTTCGCACGC
CAGGTGGCCA AGGAAATGGG CGATCTGCTC AAGCAGGCCG TGATCGTGGA CAACCGGCCC
GGCGCCAGCG GCAACACCGG CACGGCCTCG GTGGCCAAGG CGGCGGCGGA CGGCTACACG
CTGGTGGCGG TCTCGTCCAG CATGACCACG AATGCCGCGG TACAGGCCAA GATGCCCTTC
GACCCCGTCA AGGACCTGGC GCCCGTGGCC ATGTTTGCCA AGGGCCCGCT GGTGGTGGCC
GTGAACAACG AATTCCCGGC CAGGACGCCG CAGGATCTGG TGCGCGCCAT CAAGGCCAGC
CCGGGCCAGT TCAACTACGC CACCTCGGGC ACCGGCAGCA TCAACCACTT CGCGACCGAG
ATGATGCGCT CCATGGTGCC GGGCATGGAC ATCATGCATG TGCCCTACAA GGGACAGGGC
CCGGCCGTGA CCGACGTGAT CGGCAACCAG GTGCAGATGC TGGTCTCCAG CGGCCCGTCC
ATCCTGCCCA TGGTGCGCAA CGGCAAGCTG CGCGCCATCG GCATCACCAG CCTCAAGCCC
AGCCCCATTG CGCCGGACCT GACGCCCATG GCAACGGCCA TCCCGGGCTA CGAATTCGAT
CTGTGGTGGG GGCTGCTGGC GCCTGCGGGC ACGCCCGCCG ACATCGTGGA CCGCCTCAAC
CAGGCCGTGA ACCAGGTGCT GGCCAAGCCG ACCATCCAGG CCAGCTTCCT GCGCGAAGGC
GCCATTGCCA ACCCCGTGAC GCCGCAGCAG TTCGCACAGG TGATCCGCAG CGACGTGGCG
CGCTGGAAGC AGCTCGCCAA GGACCGCAAT ATCCAGGCCG ATTGA
 
Protein sequence
MSISHCRARR RLVALAATTT VATLAGLASP GLMAQGAFPS KAITMVVPYP PGGSNDVFAR 
QVAKEMGDLL KQAVIVDNRP GASGNTGTAS VAKAAADGYT LVAVSSSMTT NAAVQAKMPF
DPVKDLAPVA MFAKGPLVVA VNNEFPARTP QDLVRAIKAS PGQFNYATSG TGSINHFATE
MMRSMVPGMD IMHVPYKGQG PAVTDVIGNQ VQMLVSSGPS ILPMVRNGKL RAIGITSLKP
SPIAPDLTPM ATAIPGYEFD LWWGLLAPAG TPADIVDRLN QAVNQVLAKP TIQASFLREG
AIANPVTPQQ FAQVIRSDVA RWKQLAKDRN IQAD