| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3511 |
|---|
| Symbol | |
|---|
| ID | 5749096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3857664 |
|---|
| End bp | 3858542 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641298614 |
|---|
| Product | citrate (pro-3S)-lyase |
|---|
| Protein accession | YP_001564532 |
|---|
| Protein GI | 160898950 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.402686 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTGCA TGAGAAGCAA ACTGTTTGTT CCCGCATCGC GTCCCGAGCT GTTCGCCAAG
GCCCTGGCCG GCGACGCCGA CGCACTGTCC TTCGACCTGG AGGACGCGGT GGCCGAGGCC
CGCAAGGACG AGGCGCGCGG CCTGCTGCGC AGCTTCCTGC TCAGCCCTGA AAGCCGGGGC
CATGGCAAGA CGCTGATCGT GCGCGTCAAC GCCATGGATA CGCCGCATTT CGGCGCCGAC
ATCGCCGAGA TGGTGCGCGA CGGCGTGCAC CTCATCAACC TGCCCAAGCC CGAGACCGTG
CAGCAGGTGC GCGAGGCCGC ACAGCGCATT GCCGAGGCGG CAGATGCCAA CGGCGTGGTC
CAGGCGCCTG GCCTGCTGCT CAACATCGAA ACACCCCGCG CCCTGCGCTG CGCTGCCGAA
CTGGCCAGCG CCCATGCCAG CGTGGCCGGC CTGCAGATGG GGCTGGGCGA TCTGTTCGAG
CCCTTTGGCG TGAACCGGCG CGAGCCCGCC GCCATTGCCC AGGCGCTGTT TGCCGTGCGC
ATGGCCGCCG CCGAGGCCGG CGTCTACGCC TACGACGGCG CCTTTGCCGA CATCCGCGAC
AGCGAGGGCT TCAGCGCCGA GGCCCGCCTG TCGCGCGGCC TGGGCTTTCT GGGCAAGACC
TGCATACACC CCAGCCAGAT CGCCCTGGCC AATGCGGTCT ACCAGCCCAC CGAGCAGGAA
ATCGGGCACG CCCTGAAGGT GGTGGAGGCG GCCCGCCAGG CAGATGCCAA CGCCCTGGGC
GCCTATGTGG TGGACGGGAA GATGGTGGAC AAGCCCTTCG TGCTGCGTGC CCAGGCCATC
GTGGCTGCGG CGCATGCACA GGGGCTGCTG GTGGCCTGA
|
|---|
| Protein sequence | MRCMRSKLFV PASRPELFAK ALAGDADALS FDLEDAVAEA RKDEARGLLR SFLLSPESRG
HGKTLIVRVN AMDTPHFGAD IAEMVRDGVH LINLPKPETV QQVREAAQRI AEAADANGVV
QAPGLLLNIE TPRALRCAAE LASAHASVAG LQMGLGDLFE PFGVNRREPA AIAQALFAVR
MAAAEAGVYA YDGAFADIRD SEGFSAEARL SRGLGFLGKT CIHPSQIALA NAVYQPTEQE
IGHALKVVEA ARQADANALG AYVVDGKMVD KPFVLRAQAI VAAAHAQGLL VA
|
|---|
| |