Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3502 |
Symbol | clpS |
ID | 5749087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3847153 |
End bp | 3847530 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641298605 |
Product | ATP-dependent Clp protease adaptor protein ClpS |
Protein accession | YP_001564523 |
Protein GI | 160898941 |
COG category | [S] Function unknown |
COG ID | [COG2127] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0214138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.849857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGAA TGATTTTCAT GGCAACCCAA CCCCCTTCGA TCCCTCCTGC CATCCCTACA GTGCGGCCCG TGTCCGACGA TGACGGCGCC GTGGTGCTGG AGCGGCGACG CCAGCGCGTC CAGCCGCCGC AGATGTACCA GGTCGTGATG CTCAACGATG ACTTCACGCC CATGGAATTC GTCATCATCG TCCTGCAGGA ACTCTTCGGC AAGGACCGCG AAACGGCCAC CCAGATCATG CTCAAGATCC ATCTGGATGG CCGCGGCGTC TGCGGCGTGT ACTCGCGCGA CGTGGCGGCC ACCAAGGTCG AACAGGTGCT GCAGGCGGCC CAGAAGGCAG GCCATCCGTT GCAGGCGATG TTCGAGCCTG TTGAATAA
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Protein sequence | MARMIFMATQ PPSIPPAIPT VRPVSDDDGA VVLERRRQRV QPPQMYQVVM LNDDFTPMEF VIIVLQELFG KDRETATQIM LKIHLDGRGV CGVYSRDVAA TKVEQVLQAA QKAGHPLQAM FEPVE
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