Gene Daci_3502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3502 
SymbolclpS 
ID5749087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3847153 
End bp3847530 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content62% 
IMG OID641298605 
ProductATP-dependent Clp protease adaptor protein ClpS 
Protein accessionYP_001564523 
Protein GI160898941 
COG category[S] Function unknown 
COG ID[COG2127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0214138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.849857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGAA TGATTTTCAT GGCAACCCAA CCCCCTTCGA TCCCTCCTGC CATCCCTACA 
GTGCGGCCCG TGTCCGACGA TGACGGCGCC GTGGTGCTGG AGCGGCGACG CCAGCGCGTC
CAGCCGCCGC AGATGTACCA GGTCGTGATG CTCAACGATG ACTTCACGCC CATGGAATTC
GTCATCATCG TCCTGCAGGA ACTCTTCGGC AAGGACCGCG AAACGGCCAC CCAGATCATG
CTCAAGATCC ATCTGGATGG CCGCGGCGTC TGCGGCGTGT ACTCGCGCGA CGTGGCGGCC
ACCAAGGTCG AACAGGTGCT GCAGGCGGCC CAGAAGGCAG GCCATCCGTT GCAGGCGATG
TTCGAGCCTG TTGAATAA
 
Protein sequence
MARMIFMATQ PPSIPPAIPT VRPVSDDDGA VVLERRRQRV QPPQMYQVVM LNDDFTPMEF 
VIIVLQELFG KDRETATQIM LKIHLDGRGV CGVYSRDVAA TKVEQVLQAA QKAGHPLQAM
FEPVE