Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3493 |
Symbol | sucA |
ID | 5749078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3831741 |
End bp | 3834620 |
Gene Length | 2880 bp |
Protein Length | 959 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641298596 |
Product | 2-oxoglutarate dehydrogenase E1 component |
Protein accession | YP_001564514 |
Protein GI | 160898932 |
COG category | [C] Energy production and conversion |
COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATC AGACGTCGGT CTACCAAGCC TACCAAGGCA ATACCTACCT CTTCGGCGGC AATGCCCCCT ACGTCGAAGA AATGTACGAG AACTACCTGG CCAACCCCGG TAGCGTGCCG GATTCCTGGC GCGAGTACTT TGATGCACTG CAACATGTGC CAGCAGTCGA CGGCACGGAC TCCAAGGACG TCCCGCACCA GCCCGTCATC AACGCTTTCG CCGAGCGCGC CAAGCAAGGC GGCACCAAGG TGGTCGTGGC CTCCGGCGCC GACTCCGAGC TGGGCCGCAA GCGCACCGCC GTCCAGCAAC TGATCGCCGC CTACCGCAAC GTCGGCGCAC GCTGGGCCGA TCTCGATCCC CTCAAGCGCA CCGAGCGCCC CGAAATTCCC GAGCTGGAGC CGTCGTTCTA CGGCTTCACC GATGCCGACC AGGAAACGGT GTTCAACACG AGCAACACCT TCTTCGGCAA GGAAAGCATG TCGCTGCGCG AGCTGATGAA CGCTCTGCGC GAGACCTACT GCGGCACGAT CGGCTCCGAG TACATGTATG CCACCGACCA GACGCAAAAG CGCTGGTGGC AGCAAAAGCT GGAAACCAGC CGTACCAAGC CCAGCTTTGA CGCCAACCAG AAAAAGCGCA TCCTCGACCG CCTGACGGCT GCCGAAGGCC TGGAACGCTA CCTGCACACC AAGTACGTCG GCCAAAAGCG CTTCTCTCTG GAAGGTGGCG AAAGCTTCAT CGTCGCCATG GACGAGCTGA TCAACGCTGC CGGCCAGAAG GGCGTGCAGG AAGTCGTGAT CGGCATGGCC CACCGCGGCC GCCTGAACGT GCTGGTCAAC ACCCTGGGCA AGATGCCCAA GGACCTGTTC GCCGAGTTCG ACCACACTGC CCCCGAAGAC CTGCCCGCAG GTGACGTGAA GTACCACCAG GGCTTCAGTT CCGACGTGTC CACCGCAGGC GGCCCCGTCC ACCTGTCGCT GGCCTTCAAC CCCTCGCACC TGGAAATCGT CAACCCCGTG GTCGAAGGCT CGGTGCGTTC GCGCATGGAC CGCCGCGACG ACCCGCATGG CAAGCAGGTG CTGCCCGTGC TGGTGCACGG CGATGCCGCC TTTGCCGGCC AGGGCGTGAA CCAGGAAACC CTGGCGCTGG CCCAGACCCG TGGCTACACC ACGGGCGGCA CGGTGCACAT CATCATCAAC AACCAGATCG GCTTCACCAC CTCCGATCCG CGCGACACCC GCTCCACCCT GTACTGCACC GACATCGTCA AGATGATCGA GTCGCCCGTG CTGCACGTGA ACGGTGACGA TCCGGAAGCC GTGGCCCTGG CCGTGCAACT GGCCTTGGAA TTCCGCATGG AGTTTGCCAA GGACGTGGTC GTGGACATCG TCTGCTTCCG CAAGCTGGGC CACAATGAGC AGGACACGCC TGCCCTGACC CAGCCGCTGA TGTACAAGAA GATCGGCGCC CACCCCGGCA CCCGCAAGCT GTACGCCGAC AAGCTGGCCA CGCAAGGCCT GGGCGAGACG CTGGGCGACG ACATGGCCAA GGCCTACCGT GCCGCCATGG ACGAAGGCCG CCACACCGTG GACCCGGTGC TGACGAACTT CAAGAGCAAG TACGCCGTGG ACTGGAGCCC GTTCCTGGGC AAGACCTGGA CCGACGCCGG CGACACCGCC ATCCCGCTGA CCGAATGGAA GCGTCTGGCC GAACGCATCA CCACCATCCC CGAGACCGTG ACCCCGCACG CGCTGGTCAA AAAGGTCTAT GACGACCGCG CAGCCATGGG CCGCGGCGAT GTCAACGTGG ACTGGGGCAT GGGCGAGCAC ATGGCCTTCG CATCGCTGGT CGCATCGGGC TACCCCGTGC GCCTGTCGGG CGAGGACTGC GGCCGCGGCA CCTTCACCCA CCGCCACTCG GTCATCCATG ACCAAAAGCG TGAAAAGTGG AGCGAAGGCA CCTACATCCC GCTGCAGAAC GTGGCCGACA GCCAGGCTCC GTTCACCGTC ATCGACTCCA TCCTGTCCGA AGAGGCCGTG CTGGGCTTCG AGTACGGCTA CGCGTCGAAC GATCCCAACA CCCTGGTGAT CTGGGAAGCC CAGTTCGGCG ACTTCGCCAA CGGCGCCCAG GTGGTGATCG ACCAGTTCAT CGCCTCCGGT GAGGTCAAGT GGGGCCGCAT CAACGGCCTG ACGCTGATGC TGCCGCACGG CTATGAAGGC CAGGGCCCCG AGCACAGCTC GGCACGCCTG GAGCGCTTCA TGCAGCTGGC CGCCGACGCC AACATGCAGA TCGTGCAGCC CACCACGGCC AGCCAGATCT TCCACGTGCT GCGTCGCCAG ATGGTGCGCC CGCTGCGCAA GCCGCTGGTC ATCATGACCC CCAAGTCTCT GCTGCGTAAC AAGGATGCGA CCTCGCCGCT GTCCGAGTTC ACCAGCGGTG GTTTCCAGAC CGTGATCCCC GAGCAGGACG AAGCCGTCGT GAAGAACGCG GCCAAGGTCA AGCGCGTGAT CGCTTGCTCG GGCAAGGTCT ACTACGACCT GGTCAAGAAG CGCGCCGAGA AGGAAAGCAA GGACGTCGCC ATCATCCGCG TCGAACAGCT GTACCCCTTC CCGCACAAGG CCTTCGCCGC TGAACTCAAG AAGTTCGGCA ACGCCACCGA GATCGTCTGG TGCCAGGACG AGCCGCAGAA CCAGGGCGCC TGGTTCTTCG TGCAGCACTA CATCCACGAG AACATGCTCG ATGGCCAGAA GCTGGGCTAC TCCGGCCGCG CTGCCTCGGC ATCGCCCGCC GTGGGTTACG CACACCTGCA CCAGGAGCAG CAAAAGGCCC TGGTGGAAGG CGCGTTCTCC AAGCTCAAGG GTTTTGTCCT GAACAAGTAA
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Protein sequence | MSDQTSVYQA YQGNTYLFGG NAPYVEEMYE NYLANPGSVP DSWREYFDAL QHVPAVDGTD SKDVPHQPVI NAFAERAKQG GTKVVVASGA DSELGRKRTA VQQLIAAYRN VGARWADLDP LKRTERPEIP ELEPSFYGFT DADQETVFNT SNTFFGKESM SLRELMNALR ETYCGTIGSE YMYATDQTQK RWWQQKLETS RTKPSFDANQ KKRILDRLTA AEGLERYLHT KYVGQKRFSL EGGESFIVAM DELINAAGQK GVQEVVIGMA HRGRLNVLVN TLGKMPKDLF AEFDHTAPED LPAGDVKYHQ GFSSDVSTAG GPVHLSLAFN PSHLEIVNPV VEGSVRSRMD RRDDPHGKQV LPVLVHGDAA FAGQGVNQET LALAQTRGYT TGGTVHIIIN NQIGFTTSDP RDTRSTLYCT DIVKMIESPV LHVNGDDPEA VALAVQLALE FRMEFAKDVV VDIVCFRKLG HNEQDTPALT QPLMYKKIGA HPGTRKLYAD KLATQGLGET LGDDMAKAYR AAMDEGRHTV DPVLTNFKSK YAVDWSPFLG KTWTDAGDTA IPLTEWKRLA ERITTIPETV TPHALVKKVY DDRAAMGRGD VNVDWGMGEH MAFASLVASG YPVRLSGEDC GRGTFTHRHS VIHDQKREKW SEGTYIPLQN VADSQAPFTV IDSILSEEAV LGFEYGYASN DPNTLVIWEA QFGDFANGAQ VVIDQFIASG EVKWGRINGL TLMLPHGYEG QGPEHSSARL ERFMQLAADA NMQIVQPTTA SQIFHVLRRQ MVRPLRKPLV IMTPKSLLRN KDATSPLSEF TSGGFQTVIP EQDEAVVKNA AKVKRVIACS GKVYYDLVKK RAEKESKDVA IIRVEQLYPF PHKAFAAELK KFGNATEIVW CQDEPQNQGA WFFVQHYIHE NMLDGQKLGY SGRAASASPA VGYAHLHQEQ QKALVEGAFS KLKGFVLNK
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