Gene Daci_3492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3492 
Symbol 
ID5749077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3830346 
End bp3831509 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content65% 
IMG OID641298595 
Producthypothetical protein 
Protein accessionYP_001564513 
Protein GI160898931 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.705437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC TGCCCTTACA CAAACGCACT TTCATGCTGC TGCTGATCGC GGCGACCATC 
GGCTTCGGTG CCGTGCTCTG GGAATTCATG GGGGCCATCT TCTGGGGCGT CGCCCTGGCC
ATCCTGTTCT CGCCGCTGCA CCGGCGCCTG CTGGCACGCA TGCCCCGGCG CACCAATCTC
GCCGCCCTGT CCACCCTGCT GCTGTGCCTG GTCGTGGCCA TCCTGCCGCT GGCGCTGATC
GGCGCCTCCC TGGTGCGCGA GGCCTCGTTG ATCTATGAGC GCGTCAACAG CGGCAACCTG
GACGCGGGCA CCTATCTGCA ACAGATCATG GACGCCCTGC CCTCCTGGGT CACACCCTGG
CTGGAGAGGT TGCACCTGGG TTCGCTGGCC GAGCTGCAGG ACAAGCTGTC CAGCATCGCC
ATGCAGGCCT CCAAGCTGGC GGCCACCAAG GCGCTGGGCA TAGGCCAGAA CACGTTCGGC
TTCTTGGTGG GCTTTTGCGT GATGCTGTAC CTGCTGTTCT TCCTGCTGCG CGACGGCCGT
GACCTGACCC AGCGCATCCG CATGGCCATT CCGCTGCAGG CCGACCACAA GGCCGAACTG
TCGAGCAAGT TCACCACCGT GATCCGCGCC ACCGTCAAGG GGAACCTGGC CGTGGCGGCC
GCACAGGGCG CGCTGGGCGG GCTGATCTTC TGGATTCTGG GCATCCAGGG GCCCGTGCTG
TGGGGCGTGG TGATGGCCTT CCTGTCGCTG CTGCCTGCCG TGGGCGCCGG CCTGATCTGG
GCACCGGTGG CCATCTACTT CCTGGCCACC GGTGCCATGG GCAAGGGCCT GATCCTGATC
GCCTACGGCG TGTTGGTGAT CGGCCTGGTG GACAACGTGC TGCGCCCCTT GCTGGTGGGC
AAGGACACGA AGATGCCCGA CTACATCGTG CTGATCTCGA CGCTGGGCGG CATGGCTCTC
TTCGGACTGA CGGGTTTTGT GATAGGCCCC GTGATCGCGG CCCTGTTCAT GGCGATCTGG
GACATGTTCT CGCGCATGCA AGTGCAGGAT GAGGAAAAGC GCCGCCAACT TGCCCAGGCA
GGTTTGGCGC ATGCTGAATA TCAGACATCG GATGATATGG ACCTCAAGCA AGCACCGCAC
GATCCGCGCC CGCCGGCACG CTGA
 
Protein sequence
MNLLPLHKRT FMLLLIAATI GFGAVLWEFM GAIFWGVALA ILFSPLHRRL LARMPRRTNL 
AALSTLLLCL VVAILPLALI GASLVREASL IYERVNSGNL DAGTYLQQIM DALPSWVTPW
LERLHLGSLA ELQDKLSSIA MQASKLAATK ALGIGQNTFG FLVGFCVMLY LLFFLLRDGR
DLTQRIRMAI PLQADHKAEL SSKFTTVIRA TVKGNLAVAA AQGALGGLIF WILGIQGPVL
WGVVMAFLSL LPAVGAGLIW APVAIYFLAT GAMGKGLILI AYGVLVIGLV DNVLRPLLVG
KDTKMPDYIV LISTLGGMAL FGLTGFVIGP VIAALFMAIW DMFSRMQVQD EEKRRQLAQA
GLAHAEYQTS DDMDLKQAPH DPRPPAR