| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3490 |
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| Symbol | |
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| ID | 5749075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3826923 |
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| End bp | 3829349 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641298593 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001564511 |
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| Protein GI | 160898929 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.657613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACC ATTGGGTCGA CATCAAGAAC GCGGACGTTA TCCTGATCAT GGGCGGCAAT
GCCGCTGAAG CACATCCCTG CGGTTTCAAG TGGGTGACCG AAGCGAAGGA GCACAACGGT
GCGCACTTCA TGGTGGTCGA TCCGCGCTTC AACCGCTCCG CCTCCGTGGC CGATTTCTAT
GCCCCCATCC GGTCGGGCTC GGACATCGTG TTCCTGGGTG GCGTGATCAA CTATCTGCTC
ACGAACGACA AGATCCATCA CGAATACGTG AGGAACTACA CCGACTTCTC GTACATCGTG
AAGGAGGAGT TTGCGTTCGA CGAAGGCATC TTCTCGGGCT ACGACCCGCA GACACGCAAA
TACGACAAGT CCAGCTGGGA CTATGAGCTC GACGCCGACG GCTACGTGAA GGTGGACGCC
AGCCTGCAGC ATCCGCGCTG CGTGTACCAA TGGCTCAAGC GCCACTACGC CAGCTACACG
CCCGAGAAGG TGGAGAGCGC CTGCGGCACG CCCAAGGAAA AATTCCTGCA CGTGTGCGAG
AAGCTGGCAT CGACCGCCGT GCCGGGCCGC GTCGCGACCA TCCTGTACGC ACTGGGCTGG
ACACAGCACA CCACGGGCGC GCAGATCCTG CGCACGGGCG CCATGGTCCA GCTGCTGCTG
GGCAATATCG GCGTGGCAGG CGGCGGCATG AACGCGCTGC GCGGGCACTC CAACATCCAG
GGCCTGACGG ACCTGGGCAT CCTGTCTGCC TCGCTGCCCG GCTACCTGAC GCTGCCCAAC
GAAGGCGAGC AGGACTACCA GAAGTACATC GACGCGCGCA CGCCCAAGGC CATGCGCCCG
GGCCAGATGA ACTACTGGTC GAACACGCCC AAGTTCCACG TGAGCCTGAT GAAGGCCTGG
TGGGGACCGG CGGCCACGGC CGAGAACAAC TGGGCCTTCA ACTACCTGCC CAAGCTGGAC
AGGCAGTACG ACATGCTGCA GGTGTTCGAC CTGATGGCGC AGGGCAAGAT CAACGGCTAC
ATCGCCCAGG GCTTCAACCC GCTGGCAGCC CTTGCGAACA GCAACAATGT GCGCGAAGGC
CTCAAGAAGC TGAAGTTCCT GGTGATCATG GATCCGCTGG TCACCGAGAC ATCGGAGTTC
TGGCAGAACC ACGGCGAGTT CAACGACGTG GATCCGGCAT CGATCCAGAC CGAGGTGTTC
CGCCTGCCCA CGACCTGCTT TGCAGAGGAA GACGGCGCCG TCGTCAGTTC CTCGCGCGTG
CTGCAGTGGC ACTGGAAGGC GGCCGAGCCC CCGGGCGAGG CCAAGACCGA CATCGCCATC
ATGTCGGCCC TGCACCTGCG CCTGAAGCAG GCCTATGAGA AGGACGGCGG CAAGTTCCCC
GAGCCGATCA CCAAGCTGTG GTGGCCCTAT GCCCATGCCG ATCATCCGAC CTCGGAAGAG
ATCGCCAAGG AGTACAACGG CCGCGCCCTG GTGGACCTGT TCGACCCCAA GGACCCGACC
AAGCTCATCC GCAAGGCCGG CGAGCAGCTG GCCGGCTTCG GCGAGATGCG CGACGACGGC
ACGACGATGG GCGGCTGCTG GATCTGGGCC GGCTGCTGGA CCTCGTCCGG CAACCAGATG
GCCCGGCGCG ACAACAGCGA CCCCACGGGC ATAGGCAACA CGCTGAACTG GGCCTGGGCC
TGGCCGGCCA ACCGCCGCGT GCTCTACAAC CGCGCCTCCT GCGACCGCAA CGGCCAGCCG
TTCGATCCCA AGCGCACGCT GATCCGCTGG AACGGCAAGG CCTGGGGCGG TGCCGACGTG
CCCGACATGG GCCCGACCAT GCCGCCGGAG ACCACCGATC CGTTCATCAT GAACCCCGAG
GGCGTGGCGC GCTTCTTCGC CCGCAAGGGC ATGAACGAGG GACCGTTCCC CACCCACTAC
GAGGCCTTTG ACAACCCGCT GGGATACAAC CCCATGTATC CCGACAACAA GCTGGCGGTC
ATCAACCCGG CCACGCGGAT CTTCGACTCC GTCAAGGATT CGGCGGGCTC GCCCAGCGAG
TTCCCGCACG TGGGCACGAC GTACCGCCTG ACCGAGCACT TCCACTACTG GACCAAGCAC
GTTCAGCTGA ACAACATCGT TCAGCCCGAG CAGTTCGTGG AAATCGGCGA GGCGCTGGCC
AAGGAACTGG GCATCGAGAC CGGCCAGCAT GTGAAGGTCA GCTCCAAGCG CGGCTTCGTC
AAGGCCGCCG CCGTGGTGAC CAAGCGCATC AAGCCCATGA AGATCGATGG CAAGACCATC
CACCACGTGG GCGTGCCCAT TCACTGGGGC TTCTCGTCCA CGGGCCGCAA GGGCTACATG
GCCAACAACC TGACGGCATC GGTGGGCGAT GGCAACAGCC TTACCCCGGA ATCCAAGACC
TTCCTCGTGA AGGTGGAAAA GGTTTAA
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| Protein sequence | MTNHWVDIKN ADVILIMGGN AAEAHPCGFK WVTEAKEHNG AHFMVVDPRF NRSASVADFY
APIRSGSDIV FLGGVINYLL TNDKIHHEYV RNYTDFSYIV KEEFAFDEGI FSGYDPQTRK
YDKSSWDYEL DADGYVKVDA SLQHPRCVYQ WLKRHYASYT PEKVESACGT PKEKFLHVCE
KLASTAVPGR VATILYALGW TQHTTGAQIL RTGAMVQLLL GNIGVAGGGM NALRGHSNIQ
GLTDLGILSA SLPGYLTLPN EGEQDYQKYI DARTPKAMRP GQMNYWSNTP KFHVSLMKAW
WGPAATAENN WAFNYLPKLD RQYDMLQVFD LMAQGKINGY IAQGFNPLAA LANSNNVREG
LKKLKFLVIM DPLVTETSEF WQNHGEFNDV DPASIQTEVF RLPTTCFAEE DGAVVSSSRV
LQWHWKAAEP PGEAKTDIAI MSALHLRLKQ AYEKDGGKFP EPITKLWWPY AHADHPTSEE
IAKEYNGRAL VDLFDPKDPT KLIRKAGEQL AGFGEMRDDG TTMGGCWIWA GCWTSSGNQM
ARRDNSDPTG IGNTLNWAWA WPANRRVLYN RASCDRNGQP FDPKRTLIRW NGKAWGGADV
PDMGPTMPPE TTDPFIMNPE GVARFFARKG MNEGPFPTHY EAFDNPLGYN PMYPDNKLAV
INPATRIFDS VKDSAGSPSE FPHVGTTYRL TEHFHYWTKH VQLNNIVQPE QFVEIGEALA
KELGIETGQH VKVSSKRGFV KAAAVVTKRI KPMKIDGKTI HHVGVPIHWG FSSTGRKGYM
ANNLTASVGD GNSLTPESKT FLVKVEKV
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