| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3483 |
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| Symbol | |
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| ID | 5749068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3818707 |
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| End bp | 3819936 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298586 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001564504 |
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| Protein GI | 160898922 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0776435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTGT CCCTGTCCGG CAATGCCTCC CTGCGCAACG TGATCCGCCG CGCGCACCTG
CGCATGGCGG CGGTGGCCAT CGCGCTGGCG GGGGCGCTGC TGCTCATCGT CGGCGTGGCC
ACCCTGCGCC TGTACCTATC CAACAACCTG CATCTGGTGG CCCGTTCGCT GGCCTATACG
GTCGAGGCAT CGCTGGTCTT CGGTGACCGC GACGAAGCCG CCCGCGTACT GGACCAGCTG
CTGCGTGGCG AAGGCGTGGC CCACGCCGAG GTCTTCGATG CCGAGGGCCG TCCGTTCGTG
CGGTGGTCGG GCCATGGTGG CTCGGCGCTG TCCAGCATCG GGGAGCTGCT GGCCGTGGGC
ATTGGCCTGC CGCGCGCCGA GGCCGATGTG CGCCAGGACG GCAGGCTGGT CGGCAGTGTG
CAGCTGGCCA GCGATGGCGT GGGCCTGGTC CGCTTCCTGG GCGCAGGTTT CATCGTGCTG
GTGCTGTGCG TGGGTGTCAG CGGCTATGTG GGCCTGCGCC AGTCGCGCCG CATGCTGCGC
GACATTGCCG AGCCGTTGCA GCAGCTGGCG CGCGTGGCCC GGGCCGTGCG CCATGACCGA
TCCATGGACC AGCGCGTGCC GCTGGCGCGC ATTGCCGAGC TGCGCGAGTT GGGCGACAAC
TTCAACGCGC TGCTGGCCGA GCTGCAGACG CGCCATGAGC GGCTGCAGCA GCAAAATTCG
GCCCTGGAGC GGCAGGCTTC GCGCGACAGT CTCACCGGGC TGGCCAACCG GCTGCATTTC
GAGCAGCGAC TTCAGCAGGC GCTGGACAGT GCAGCGGAGA GCGGGCAGAA GCTGGCCGTG
CTGTTTCTGG ACAACGACCG CTTCAAGCAG GTCAACGACG CCTACGGCCA TGCCGTGGGC
GATGTGCTGC TCAAGGCGGT GGGTGCCCGG CTGCGCTCGC AGGTGCGCGA GACCGATCTG
GTCGCGCGGC TGGGCGGCGA CGAATTCGCC ATCTTGCTCT ATCCCGTGGG CGGGGGCGGC
GATGCGCAGA TGGTGCGGGA CAAGATAGAG GCTGCCATGC GCGAGCCATT GGTGGTCAGC
GAAGGCGTGG TGCTGCAGCC TTCGGTCAGC GCGGGCGTCG CCCTTTTTCC CAAGCATGGC
CAGAGCATGG AGACGCTGAT GCGCCATGCA GACCAGGCCA TGTACCAGGC CAAGGCCATG
CGCCAGGCCG AACGAATCAC AGGAGGATGA
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| Protein sequence | MKLSLSGNAS LRNVIRRAHL RMAAVAIALA GALLLIVGVA TLRLYLSNNL HLVARSLAYT
VEASLVFGDR DEAARVLDQL LRGEGVAHAE VFDAEGRPFV RWSGHGGSAL SSIGELLAVG
IGLPRAEADV RQDGRLVGSV QLASDGVGLV RFLGAGFIVL VLCVGVSGYV GLRQSRRMLR
DIAEPLQQLA RVARAVRHDR SMDQRVPLAR IAELRELGDN FNALLAELQT RHERLQQQNS
ALERQASRDS LTGLANRLHF EQRLQQALDS AAESGQKLAV LFLDNDRFKQ VNDAYGHAVG
DVLLKAVGAR LRSQVRETDL VARLGGDEFA ILLYPVGGGG DAQMVRDKIE AAMREPLVVS
EGVVLQPSVS AGVALFPKHG QSMETLMRHA DQAMYQAKAM RQAERITGG
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