Gene Daci_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3482 
Symbol 
ID5749067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3818048 
End bp3818710 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID641298585 
Producthypothetical protein 
Protein accessionYP_001564503 
Protein GI160898921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0571375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCAGT GCGCCAGCGT GGCGCAATGC ATGGATATTC CGTTCAAGGA GCCTTGGTTG 
GCAGCTCGCA CACATCGCAT ACATCACACA TACCGCAGGT GGGGCATGGA TTGCAGGATC
AAAGGCCTGT CTGCCCGGGC CTGGCTGGTC GTGGGTCTGC TGGCCTTGCA GGCCGGGCTG
GTGGGGCATG CACATGCGGA GCCGGCGGCC GATGAGCATG AGCTGGGAGT GACGCGCACC
GTCGTAGGCA TCCTGGGCTA CACGCGCTGG CCCACGGAAA GCCCCGTGCT GCGGCTGTGC
GTGGTGGGCT CCACCGAATA TGCCGACGAC CTGCTCAATG GCGCCCCGCA GACCGTGGGC
AGCCAGCGGC TGGAGGTGCG GCGCGTGGCG CCCGTCGATG CGCGCGCACT GGTCGAATGC
GAGGGCATTT ATGCCGGCCA GCTCGATGAG GCGGCCTGGC GCAAGCTCAT GGAGCAGCTG
GCCGGGCGGC CGCTGCTGAC CATCAGCGAG CGGGGCGAGC TGTGCCGCAT CGGTGCCATG
TTCTGCCTGC GCCGCCGTGG CGAGGGCGCG GGCTTCGAGG TCAGCCTCGA CTCCGTGGCC
CGCAGCGGCC TGCGTGTCAA TCCCAAGGTG CTGCAACTGG CGCGCCACAG GACCTTGCCA
TGA
 
Protein sequence
MLQCASVAQC MDIPFKEPWL AARTHRIHHT YRRWGMDCRI KGLSARAWLV VGLLALQAGL 
VGHAHAEPAA DEHELGVTRT VVGILGYTRW PTESPVLRLC VVGSTEYADD LLNGAPQTVG
SQRLEVRRVA PVDARALVEC EGIYAGQLDE AAWRKLMEQL AGRPLLTISE RGELCRIGAM
FCLRRRGEGA GFEVSLDSVA RSGLRVNPKV LQLARHRTLP