| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3479 |
|---|
| Symbol | |
|---|
| ID | 5749064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3812783 |
|---|
| End bp | 3813262 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641298582 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001564500 |
|---|
| Protein GI | 160898918 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.623546 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACC GTCTTGATGA AACCGACCGC CAGCTGCTGC GTCTGCTGCA GACCAATGCA
CGGGCTTCCA CCGCACATCT GGCTCGGCAG ATGAATCTGG CGCGCACCAC GGTGGTGGCG
CGCATTGCCA GGCTGGAGCA AGAGGGCGTG ATCGCCGGCT ACGGCGTGCG CCTGGGCGCA
CGCGTGGAGC AGTCTGCCGT GCGGGCGTAT TGCGGCATCC GCGTGCAGCC CAAGACGGCC
ACGTTGGTCA TGCAGGCGCT CAACCGCTTC ACCGAGGTCG AGGAGGTCTC TGCCGTCAGC
GGCCAGTACG ACTACATGGT GTTCGTGCGC TGCGAGAGCA ATGAAAAGCT CGATGCGCTG
CTGGACCGCA TCGGCCTGAT CGACGGCATT CAGCAGACCT ATACCTCGGT GGTGCTCAGC
CGCAAGATCG ATCGGCGCAC GACGGCGGCC CTGAGCCAGC CGGGCGAATC CGCTGCCTGA
|
|---|
| Protein sequence | MEYRLDETDR QLLRLLQTNA RASTAHLARQ MNLARTTVVA RIARLEQEGV IAGYGVRLGA
RVEQSAVRAY CGIRVQPKTA TLVMQALNRF TEVEEVSAVS GQYDYMVFVR CESNEKLDAL
LDRIGLIDGI QQTYTSVVLS RKIDRRTTAA LSQPGESAA
|
|---|
| |