| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3470 |
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| Symbol | |
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| ID | 5749055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3801293 |
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| End bp | 3802690 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641298573 |
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| Product | EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) |
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| Protein accession | YP_001564491 |
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| Protein GI | 160898909 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
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| TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.236766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACAGT GGGCGTGCGC TGCCGCTGCA AGGCCTGCGG GCAGCCCGGC AACCCTAGAA
TCACGCGTTG TCCTATCGCT GCTAGCGCTG CACCCCATGT CCAATCTCAT CGTCCACGGC
GGCACGCCTT TGCGCGGCCG CGTCGTTCCC TCCGCCAACA AGAATGCCGT GCTGCCGATT
CTGTGCGCCA CGCTGCTGAC CGATCAGCCG CTGCGGCTGC ATGGCGTGCC GGACATCACG
GATGTGCGCA AGATCCTCGA CATCTTTCGC ACGCTGGGCA GCGAGGTGCA ACTGGACGAG
GCCACGCGCA CGCTGCAGCT GCACCACCGC GACACGCGCT TCGACGCGTC CTCGCACCGC
CTGCCCGAGG AAATGCGCTC TTCCATCATG CTGGTGCCGC CGCTGCTGGC GCGCTTTGGC
GTGGCACGGC TGGAGGACAA CGTCAAGGGC TGCACGCTGG GCGTGCGCGA GATCGATCCG
CACGTGGACA TCTTTCGCTC CTTTGGCGGA GAGGTGGAGC GCGCCAGCGG CTCCCTGCTG
ATCCACAGTG CCGCGCCGCT CAAGGCCGTG CGCCACTGGC TGGACTATGC ATCGGTCACG
GCCACGGAGA ACTTCGTGCT GTGCGCCGTG GCTGCGCAGG GCGAGTCCAT GCTGACCAAT
GCAGCCTGCG AGCCGCATGT GCAGGAGTTC TGCCGCTTCA TGGTGATGAT GGGTGCAGAT
ATTGACGGCA TCGGCACCTC GCGGCTGACG GTGCGCGGCG GTGCGCCGCT GGGCGGCGGC
GATTTCACCT TCGAGGAAGA CTTCCACGAG ATCACCACCT TTCTCGCGCT GGGTGCGATC
ACGGGCGGCG ATGTGGAGGT GCGCAACAGC ACGCCGGACA ACTTTCCGCT GATCGACCGC
ACCTTCGCCA AGTTTGGCGT GCAGGTGGAG CACAAGAACG GCTGGTCGCG CGCGCTGCGC
TCGGGGCCGC TGAAGGTGCA GACGCCTTTC ACCAGCAATG TGCTCACCAA GGTGGAAGCC
GCTCCCTGGC CGTACTTTCC GGTGGATCTG CTGCCGATCT TCATTGCGCT GGGTGTGCAT
GCGCAGGGCA ATGCGCTGTT CTGGAACAAG ATCTACGACG GCGCGCTGGG CTGGACGGGC
GAGCTATCCA AGTTCGGCGC CCATGTGTTT TCTTCGGACC CGCATCGCGT GGTCACCTTT
GGCGGCAATC CGCTGACGCC GGCCGTGGTG GAGAGCCCCT ACATCATCCG CGTGGCGATT
GCGCTGTTCA TGGTCGCCAG CAGCATCGAG GGTCGATCGG AGATCCGCAA CGCCACGCCG
ATTCGCCGTG CGCATCCGCA CTTTGTCGAG AACCTGCGCA GCCTGGGCGC GCGGGTGGAG
TGGACCAACG AGGAGTGA
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| Protein sequence | MKQWACAAAA RPAGSPATLE SRVVLSLLAL HPMSNLIVHG GTPLRGRVVP SANKNAVLPI
LCATLLTDQP LRLHGVPDIT DVRKILDIFR TLGSEVQLDE ATRTLQLHHR DTRFDASSHR
LPEEMRSSIM LVPPLLARFG VARLEDNVKG CTLGVREIDP HVDIFRSFGG EVERASGSLL
IHSAAPLKAV RHWLDYASVT ATENFVLCAV AAQGESMLTN AACEPHVQEF CRFMVMMGAD
IDGIGTSRLT VRGGAPLGGG DFTFEEDFHE ITTFLALGAI TGGDVEVRNS TPDNFPLIDR
TFAKFGVQVE HKNGWSRALR SGPLKVQTPF TSNVLTKVEA APWPYFPVDL LPIFIALGVH
AQGNALFWNK IYDGALGWTG ELSKFGAHVF SSDPHRVVTF GGNPLTPAVV ESPYIIRVAI
ALFMVASSIE GRSEIRNATP IRRAHPHFVE NLRSLGARVE WTNEE
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