Gene Daci_3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3462 
Symbol 
ID5749047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3793606 
End bp3794298 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content58% 
IMG OID641298565 
Producthypothetical protein 
Protein accessionYP_001564483 
Protein GI160898901 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.161645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCAG CACTCAAGAA GTCCGCAGCG GCAGCTGCTA TGTGCCTCGC AGCCATCGGG 
GCCGTTCACG CAGCTACCTA CAGCGCGGCA ACCACTGGAC CCTACACTGC AAAAACGGAC
TTCACCGTGT GTAGCGGTGG TCCGTGCCAG AACTACACCC TGGCCATGAC CCCCTCTGGC
TCGTTCACTA CTTCGGCGCC ACTTGCAGCC AACCTTTCGA ACGCAAACAT CGCAGCGCAA
ATCACATCAT TCAGCTTCAA CGATGGGATC AACACGTTTG CGAGCACCGA CCCCAACGTG
AGGATCTTCC AAGCAATCGT CTCAACATCT GCTACCGGCT CTATTACAAG TTCCGCCCTC
TTACTCGAAC TCTGGCAGAC GGGAACGTCG CCACATGCAG TTGGCGACAA GGTGGCCCTT
ATTCAGATTG GAAACAGTGT CTTCGCAACG AATACTCTCA ACTGCACAGG GGTTGGAACG
ACCCCTGCGG GAGCAGCTGA CTCGTGCGTT TTGGGCCCTG GGGATATCGG TGCCTCGAAT
GCGAGCGGCG CGGCATGGAC TTGGGCAGCC GTCACACCTC CAGCGACCGC AGCAACACCG
GTGCCGTCAA TGTCTGCCCT CGGCTTGCTC GTTCTATCAG CTCTGTTAGG CGGGGCCGGT
TTGGCAATCT CAAGGCGCAA TCGCAACGCT TAA
 
Protein sequence
MKSALKKSAA AAAMCLAAIG AVHAATYSAA TTGPYTAKTD FTVCSGGPCQ NYTLAMTPSG 
SFTTSAPLAA NLSNANIAAQ ITSFSFNDGI NTFASTDPNV RIFQAIVSTS ATGSITSSAL
LLELWQTGTS PHAVGDKVAL IQIGNSVFAT NTLNCTGVGT TPAGAADSCV LGPGDIGASN
ASGAAWTWAA VTPPATAATP VPSMSALGLL VLSALLGGAG LAISRRNRNA