Gene Daci_3457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3457 
Symbol 
ID5749042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3789329 
End bp3790138 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content64% 
IMG OID641298560 
Producthypothetical protein 
Protein accessionYP_001564478 
Protein GI160898896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0152362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACA TCGTCTGCTA CTCGGGTGGG CACAGCTCGG CCTTGGTCGC GCTCGACGTG 
GCCCACCGCT TCGGCACGCG CAACCTGGTG CTGCTCAACC ACGACATGCA CTTCAGCGTC
GAGCATGCCG ACATCAAGCG CTTCAAGCGC GACGTGGCCG AGCACCTGGG CGTGCCATTG
ACCTTCGCCA GCCGGCGCAA CGCCAGGCAG GACCAGTTCG ACGTGTGCGT GGAGGCCCAG
GCGTTCAAGG TCGGCAGTGG TTCAGAGCTG TGCACCGCAC GGCTCAAGAC CGAGCCGTTC
ATGGAGTGGT TGGCGGTCAA TGCATCCCAG GGCGAGAGCG TCATCTACTA CGGCTTCGAC
GCCACGGAAC CCGGGCGCAT CCAGCGGCGC ACCGGGATCA TGGGCGCCCT GGGCTGGAAG
ACCGACTATC CGCGCCTCTG GAACGACCGT AAGCACGACA GCACGGAGGC CCTGGGCATC
CCGCGCCCGT GCACATACGG CGTCTTCAAG CACGGCAACT GCATCGGCTG CCTCAAGGCC
GGCTGGCAGC ACTGGTACAT CGTCTACTGC ACGCGCCCTG ACATCTGGCT CAAAGCCCAA
TGGGCCGAGG ACGAGATAGG CCACGCGATC CACTGGGACG GCGACAAACC GGTCTACCTG
GAGGACATGG CCGCGAAGTT TGCCGCAATG CAGGCGAACG GCATCCCGGC AACTGAGCAC
ATCCCGCACC AACGGTTCTG GGCTCATGCA AACAAGATCA TCCGCATCAA CGTACTACAG
GAGGCACTGC CATGCGAGTG CACCTCGTAA
 
Protein sequence
MQHIVCYSGG HSSALVALDV AHRFGTRNLV LLNHDMHFSV EHADIKRFKR DVAEHLGVPL 
TFASRRNARQ DQFDVCVEAQ AFKVGSGSEL CTARLKTEPF MEWLAVNASQ GESVIYYGFD
ATEPGRIQRR TGIMGALGWK TDYPRLWNDR KHDSTEALGI PRPCTYGVFK HGNCIGCLKA
GWQHWYIVYC TRPDIWLKAQ WAEDEIGHAI HWDGDKPVYL EDMAAKFAAM QANGIPATEH
IPHQRFWAHA NKIIRINVLQ EALPCECTS