Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3452 |
Symbol | |
ID | 5749037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3787407 |
End bp | 3787958 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641298555 |
Product | putative lysozyme |
Protein accession | YP_001564473 |
Protein GI | 160898891 |
COG category | [R] General function prediction only |
COG ID | [COG3179] Predicted chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.172669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCA CACCTGAAAT CGTCTCGGCA TGCACGGGCG CCACGCTGTT GCGCGCGACC CAATGGACCT CTGCAATCAC CGAAGCCTGC GCGCGTTATG GCATCGACTC GCCAGCTCGC GCAGCAGCTT TCCTGGCCCA GGTGGGGCAC GAATCTGGCC GCCTGGTCTA TGTGCGCGAG ATCTGGGGTC CTACTGCGGC ACAGCTGCGG TACGAGGGCC GCCGTGACCT GGGGAACATC GAGCCCGGCG ACGGCAAGCG GTACATGGGC CGAGGGCTCA TCCAGGTCAC CGGTCGGGAC AACTACAAGG CGGCGACTCG GGCCTTGCGT GCCGTCGAGC CTCGAGCACC AGACTTCGAG CACGACCCCG CGGCGCTTGA ACAGCCTGCA TGGGCAGCCT TGTCCGCAGC CTGGTTCTGG CACAGCCGAG GCTTGAACAC CCTTGCCGAC CGCGGCGATT TCTTGGGCAT CACCAAGAAG ATCAACGGCG GCACGAACGG CTTGGATGAC CGCTTAGCGT TGTGGGCGGC TGCCAAGAAG GTGCTGGTGT GA
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Protein sequence | MKLTPEIVSA CTGATLLRAT QWTSAITEAC ARYGIDSPAR AAAFLAQVGH ESGRLVYVRE IWGPTAAQLR YEGRRDLGNI EPGDGKRYMG RGLIQVTGRD NYKAATRALR AVEPRAPDFE HDPAALEQPA WAALSAAWFW HSRGLNTLAD RGDFLGITKK INGGTNGLDD RLALWAAAKK VLV
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