| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3444 |
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| Symbol | |
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| ID | 5749030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3775330 |
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| End bp | 3778044 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641298549 |
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| Product | phage tape measure protein |
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| Protein accession | YP_001564467 |
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| Protein GI | 160898885 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3941] Mu-like prophage protein |
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| TIGRFAM ID | [TIGR02675] tape measure domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.144492 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGG CCGACAAGGC CGCCGGCCTG CTGAAGAACA GCATGGGCCA GATCACCGCA
GGCAATCTGA TTGCAGACGC CATTGGGTAC TTGGTCAACA AGGTCAAGGA GATGGGGGCG
GCAGCCATAA CGGCCATTAT CCAATTGGAT CAGATGCGCC GTGGGTTAAA TGCGATCTAT
AAAGATACTG GCACTACAGC ATCCCAAATT ATTTTCTTGA ACAAGACAGC TCGTGACGCA
GGCGTTGCAG TCGGGAGTTT GGGCGGGGAG TTCGTGCGTT TTTCGGCGTC TATGCAAAGC
GCTAATATTC CGTTAGCGCA ATCTAACGCA TTGTTCGCAG CGGTTACTAA AGCCGCGGCC
ACATTGGGTC TTGATGCAGA GGCAACAGCG GGATCTTTAA ACGCCCTGGG ACAAATGGCG
AGTAAAGGTG TCGTCTCAAT GGAAGAGTTG CGACAACAAC TCGGAGATCG CTTGCCGGGC
GCCCTGGGTC TCGTTGCGAA GGGAATGGGA CTCACGCAAG CCCAACTCAT CGCTTTGGTT
GAATCAGGAA AGCTGGCAAC ACGCGATTTT GTAGAGCCAT TCACGCAGGC ATTGAAAGGA
CTGCACGGGG AAAGCACAGG GATCATCCCC GCATGGAATG ACCTCAAGAA CATGCTAACC
GCCTTAGCCC AAAGCTTGGG GGATGCGGGA GGAACGAACA TACTGACAGC TGCTATCCGG
ACGCTTAGTC TTGTCCTTGG GCTGGCCAGC GTGGCTGTAG GCGGGCTCGT TGAAGTTTTC
GGGGCGCTGT ACCGCTCAGG GGGTGTACTT GCAGCAGCGG TCATTACATG GACTAACCCA
TGGACCGCAC TGAAAGATAT ATGGTCTTCC GCTGATGATC GAGTTAAAGG CCTCGTGCAG
TCTATGGCGA AGGCCGTCAG TGGCGGTGAC TCGTTGGGGG ATAGCGCAGC CAACGTAGCC
GCAAAAATGG CGGCGGTGCA GTCTGCTGCT GAAGGTGCTA CGGAGTCATT GAAATTACAA
GCATTGACTG CGAGCCTCAA TGCCGATGCC ACGTTGAACC TAAGCGCCAA GCTTATTCAG
TATCAAGTGG CCAGCCAAGC AGCCGTAAAA GCTCAAGAGA AACGCATCGA TGACGCTGCC
AAAATTGCTA AAGCGGTCAA AGATGAAGGA GATGCAGTTA TACGCATTAC CGAACTCATG
GGGAGTGAGA TTGAGACGAC GCGTATTACA GCAGAAATGA AAGAGAAATA TTCGCAAGCC
ATTGCAGTTG AGGCAAGAGA ACGGGCTGAA GCCGTCAAAA TATTGGAGCA GGAGATTGCA
GTAATTGAAC AGAACGCCAA AGCTCGCAAC TTGGATGCGC AGGCAATTAA AGATCAAACC
GATAAGCTCA AAGAGAAACT TAACACAGGC CGGGCAGAAG CTGAGCAAGC TAAGCAGTCC
GCAGAAGTCG CTCGTGTGGA GGCGCTGCAG CGCCGCTTGA CAACGGAGAC TCTAGGGGAT
CAGTCCGTCA AGCTTGAAGC ACTGAGGGCA GCGCAAGAAG CAGCCAATAA AGAGTACGCC
CTGGCTTTAG TGTTAAAAGC GCGAGGCATG GCGACAGAGA AGAATGTCGC TGATGCGTTT
GAAAAGCAGG CTATCGCAAT TTACAAGGTG CGTGACGCAG AGAAAGATCG CAATGCCAAT
GCCGAGCTGG GTATATCGGC AATACGCACT GGTTATCAAC TATCTCTCGC CCAATATGAC
CTCGATAAAG CGAAGCTGAA TTTGGCGATC GATAAGGCAA GATCAGATGG AGATGAATAT
AAACTTAAGA AACTACTCAT CGAGCAGAAA GAACTTGAGA TAAAAATCAC CAGGACGACA
ATGGATGCAG TCATCGCGGA AACCAAGGCG AAGATTGCAA TGCTTCAGAT TAAGAAAGAG
GAAATTGGTC TGGATGATCC CTTGCGAGCG CAGAAAATTG CAGCTATCGA TCTAAGTATC
CAAGCGGCCG AAGCCGATAT CCTTCGTGCT AAAGCGGCAG GTGAGGCAGT TACTGCGTTG
GAGCGGGAGC TTAAGACGCT GAAAGAAGGA ACTGGCTTGC GAAAAGGGCT GATAGGCGAT
TTGAGAGACG AGGCGCGGGC AAGAAGCGGA GTTGTTTTGG CCAGTAAAGA TCATGCCGAC
GCCCTGGACA AGCTGGCCAT GAAGTACATG CAATCCGCTG ATTACAGCGA GCGGCAAATT
TCGCTTCTGG AACGGGAGGC GGCTGCCGCC GAGAAAGCAG CCGAGGCCTA TCGCAAGAAG
TGGAACATCG ACAAAGACGG CTTCACCCTG GATAGCAACG GACAGCGGAT GCAGCAGTCG
GCGCCTACCG AGCGATATGT CTATGACACA GCAAAAAGCC AAGGGTTGTC GGAAGCCGAA
GCAGTCGCCT TGGTCGACCA ATTCATGCGC AATGGCAACC CCACAGGTAT GGACTCCGGA
ACGCTTGGCG GGAGTAAAGA CTGGTTTACC AACGTCAACG ACGCAATCAA CCAGCGGGTC
TTGGAGAACG CAAGAACCCG GGTGCGCAAC GGGAGTAGTG GGGAGGGGAC CGCGTCGCCG
GCGGGCAGCA ACAAGACTGT GACTATCAAC CTTGGAGGTC GGCAGCGGCA AGTCAACGTA
TCCAGTGCTG CGGACGTGGA CACGCTGACG GCCATCTTCC GCGAACTCGA AGCATCTGGA
GGAACGGCAT CGTGA
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| Protein sequence | MTTADKAAGL LKNSMGQITA GNLIADAIGY LVNKVKEMGA AAITAIIQLD QMRRGLNAIY
KDTGTTASQI IFLNKTARDA GVAVGSLGGE FVRFSASMQS ANIPLAQSNA LFAAVTKAAA
TLGLDAEATA GSLNALGQMA SKGVVSMEEL RQQLGDRLPG ALGLVAKGMG LTQAQLIALV
ESGKLATRDF VEPFTQALKG LHGESTGIIP AWNDLKNMLT ALAQSLGDAG GTNILTAAIR
TLSLVLGLAS VAVGGLVEVF GALYRSGGVL AAAVITWTNP WTALKDIWSS ADDRVKGLVQ
SMAKAVSGGD SLGDSAANVA AKMAAVQSAA EGATESLKLQ ALTASLNADA TLNLSAKLIQ
YQVASQAAVK AQEKRIDDAA KIAKAVKDEG DAVIRITELM GSEIETTRIT AEMKEKYSQA
IAVEARERAE AVKILEQEIA VIEQNAKARN LDAQAIKDQT DKLKEKLNTG RAEAEQAKQS
AEVARVEALQ RRLTTETLGD QSVKLEALRA AQEAANKEYA LALVLKARGM ATEKNVADAF
EKQAIAIYKV RDAEKDRNAN AELGISAIRT GYQLSLAQYD LDKAKLNLAI DKARSDGDEY
KLKKLLIEQK ELEIKITRTT MDAVIAETKA KIAMLQIKKE EIGLDDPLRA QKIAAIDLSI
QAAEADILRA KAAGEAVTAL ERELKTLKEG TGLRKGLIGD LRDEARARSG VVLASKDHAD
ALDKLAMKYM QSADYSERQI SLLEREAAAA EKAAEAYRKK WNIDKDGFTL DSNGQRMQQS
APTERYVYDT AKSQGLSEAE AVALVDQFMR NGNPTGMDSG TLGGSKDWFT NVNDAINQRV
LENARTRVRN GSSGEGTASP AGSNKTVTIN LGGRQRQVNV SSAADVDTLT AIFRELEASG
GTAS
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