| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3406 |
|---|
| Symbol | |
|---|
| ID | 5748992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3740225 |
|---|
| End bp | 3740614 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641298511 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001564429 |
|---|
| Protein GI | 160898847 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000000202775 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0006736 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCTCA TCCAAGTTCG CAATACCAAC GACTCGGGCA CGACAACTAT TCAATCGGAC
CTGATTGAAA AAATGGAATG GGTGGGCCGT GCATGGCCGC CCTACACCGC GATCACGATA
TCCGGCAAGG TCATGACTTC AGCCGAAAGC CCCGAGGAAA TCCAATCGAA AATCCGCGCA
GCTACCGCCC AGCCCCCAAC GGCACAGTCG AAGGCTGACA CCCTGGCCCG CTACGCTGCG
GCATTCGAGC TTTGGGAAGA CGAGTTTCGC GCCGACCCCA GCACCTTCTT GACGGCGGAA
GAGATCGCCG CCATGGAAGT CGCGCCGCTG GCAGTACAGC GCGCCATGAC TTTCGTGGGC
TACCTGCGCG CCGGCGGACA GGAGGTCTGA
|
|---|
| Protein sequence | MPLIQVRNTN DSGTTTIQSD LIEKMEWVGR AWPPYTAITI SGKVMTSAES PEEIQSKIRA
ATAQPPTAQS KADTLARYAA AFELWEDEFR ADPSTFLTAE EIAAMEVAPL AVQRAMTFVG
YLRAGGQEV
|
|---|
| |