| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3405 |
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| Symbol | |
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| ID | 5748991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3738567 |
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| End bp | 3740000 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298510 |
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| Product | helicase-like protein |
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| Protein accession | YP_001564428 |
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| Protein GI | 160898846 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000469394 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00423925 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCAAGC GGTACACGCC CCGCCCGTGG CAGCCCCAGA TGACAGAACA CATGCTGCGG
GTGCCGCGGA GTAACGTGTT CGCAGGCATG GGCTCCGGGA AAACTGCGGC GACCCTGGAG
GCCCTGGCCA TCCTACTTCT GTTCGGCGTC GTCCGGCGCA TCCTGATCAT CGGCCCGAAG
CGCGTGGCGC GCGACACCTG GCGTGACGCC ATCTGCAGCT TCGGCCAGTC CTTCGGCTGG
ATGACGATCG CAGTTGCTAT CGGCGACGAG AAAAAGCGGC GCGCGGCCAT CCAGGCCGGC
TGCCACATCA CCGCCATCAA TTTCGACAAT CTGGACTGGC TGGTGGACAA CTACGGCCCT
GACTGGCCGT TCGATATGGT GGTCGTGGAC GAGTCCACCA AGCTGCGCGG CCTGCGCGTC
TCCATCCAGG CGCACAAGAA GTCCGGCAAA AAGTGGCTGG CCGGCCAGGG TGCCAGCCGG
GCGAAAGCCC TGGCGCGCGT GGCGCACACC CGGGTGCAGC GCTGGGTGAA CCTCACCGGC
ACGCCGGCCC TGGCCGGCCT GGAAGCACTC TGGGGGCCAA CTTGGTTCCT CGACGCGGGC
CACCGCCTGG GCAACTCGTT CACGGCTTTC TCGCACCGCT GGTTTCGCTC GGTGCCTGGT
TCTGACCCGC AAAAGCAGGT GATCGAGCCC ATGCCCTTCG CCGAAGAGCA GATCCGCAAC
GCCATCCGCG ACATCACCCT GGTGGTCGAC ATCAAGGACT ACGTCGATGT GGGCGCGCCG
CAGGAAAACG TGATCTACGT GGACCTGCCA GCGCCAGCGC AACGGCAATA CGACGAGATG
GCGCGCGAGC TGGCCACCGA AATCGACGGC CAGGTGATCG AGGCGTTTTC GGCCGGCACG
AAAAGCCAGA AGCTACTGCA GATCGCCAGT GGCGCGGCCT ACACAGACGA CCAGGGCGCC
TGGGCACTGG TGCACGACGA GAAGATCGAA GCGCTGAAGT CTGTCGTCGA AGAGGCCCTA
GGCATGCCGC TGCTGGTCTT TTACCACTTC AAGAGCGATC TCGCCCGAAT CCGCAAGGCC
TTCCCCAAGG CGCGCACGCT CGACGACAAG GGCGCCAAAG AGGATTTCGA GGCCGGGCGC
CTGCAGATGC TGGTCGTGCA CCCGGCCAGC GCCGGCCACG GCGTCGACGG CCTGCAGCAC
GGCACCTGCC AGTGCGTTTT CTTCTCGACC AACTGGTCGG CCGAGAACGA CGCCCAGGCA
ATCGAACGCA TCGGGCCCAC GCGCCAGATG CAGTCCGGGT ACGACCGCCC GGTCACCGTC
CATCGGCTCG TGGCGCGCGA CACCGTGGAA GAGTCCGCGA TGTACCGACT GCGCAGCCGG
GTGTCGGTCG ACGAGGCGTT GCGGCAGGGG CTGAAGAAAT ATCGCAAAAC TTAG
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| Protein sequence | MTKRYTPRPW QPQMTEHMLR VPRSNVFAGM GSGKTAATLE ALAILLLFGV VRRILIIGPK
RVARDTWRDA ICSFGQSFGW MTIAVAIGDE KKRRAAIQAG CHITAINFDN LDWLVDNYGP
DWPFDMVVVD ESTKLRGLRV SIQAHKKSGK KWLAGQGASR AKALARVAHT RVQRWVNLTG
TPALAGLEAL WGPTWFLDAG HRLGNSFTAF SHRWFRSVPG SDPQKQVIEP MPFAEEQIRN
AIRDITLVVD IKDYVDVGAP QENVIYVDLP APAQRQYDEM ARELATEIDG QVIEAFSAGT
KSQKLLQIAS GAAYTDDQGA WALVHDEKIE ALKSVVEEAL GMPLLVFYHF KSDLARIRKA
FPKARTLDDK GAKEDFEAGR LQMLVVHPAS AGHGVDGLQH GTCQCVFFST NWSAENDAQA
IERIGPTRQM QSGYDRPVTV HRLVARDTVE ESAMYRLRSR VSVDEALRQG LKKYRKT
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