| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3394 |
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| Symbol | tolB |
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| ID | 5748979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3731544 |
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| End bp | 3732869 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641298498 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001564417 |
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| Protein GI | 160898835 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0076717 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAATGA CTATTGACCG ACTCCTTTCT CCCTCCTCCC TGGCGGCCGT GCCGCGCACT
TCGCGCCGAA CCCTGCTGGC CGCTCTCGCC TCAACCCCCG CAATTCCCGC GCTGGCCCAG
TTCCGCGTCG AAGTGACGGG CGTGGGCCTG ACCCAGTTGC CCATCGCCAT TGCAGCATTC
AAGGGAGAAG GGCAGGCGCC CCAGAAGATC TCGGCCATCA TCCAGGCTGA CTTGGAGCGC
AGCGGTCAAT TCCGCGCCGT GGACACGGCC GGCGTGCAAC TGGACGAAAC CTCGCGCCCC
GACGTTGCCA TGTGGCGCCA AAAGAGCGCT GACTCGCTGG CCGTGGGCAG CATCACGCGC
CTGGCCGATG GCCGCTACGA CGTGCGCTTT CGCCTCTGGG ACGTGGTCAA GGGCCAGGAC
CTGGGCGGCC AGGGCTTTGC CGTCACCACC GGCGACTTGC GCCTGGTGGC CCACCGCATC
TCCGACTACA TCTACGAAAA ACTCACGGGC GAGAAGGGCG TGTTCTCCAC ACGCATCGCC
TATGTGACCA AGGCGGGCAG CAACTACCGC CTGTGGGTGG CCGATGCCGA TGGCGAGAAC
GCCCAGTCGG CCCTATCGAG CCCGGAACCC ATCATCTCGC CCGCCTGGTC GCCCACCGGC
ACCCAGCTGG CCTACGTGTC CTTCGAATCG CGCAAGCCCG TGGTCTATGT GCACGATGTG
GCCAGTGGCC GCCGCCGCCT GGTTGCCAAC TTCCGGGGCT CCAACAGCGC ACCGGCCTGG
TCGCCCGATG GCAACTCCCT GGCCGTCACG CTCAGCCGCG ATGGCGGCTC GCAGCTGTAC
CTGATCAGTG CCCAGGGCGG CGAGCCGCGC CGACTGATGC AAAGCAGCGG CATCGACACC
GAGCCGAACT TCTCCAGCGA CGGCCGCTCC ATCTACTTCG TCAGCGACCG TGGCGGCGCC
CCGCAGATCT ACAAGGTGCC GGCCTCGGGC GGCAGTGCGG AACGCGTCAC CTTCACCGGC
AACTACAACA TCTCGCCCAG CGTCAGCCCC GATGGAAAGT GGCTTGCCTA CGTCTCGCGC
GTGGGCGGCG GCTTCAAGCT CCACGTCATG GACCTGGGCA CCGGCACAGT GAATGCCATT
ACCGACACCA CGGCCGACGA AAGCCCCAGC TTCGCTCCCA ACAGCCGCCT GATCGTCTAC
GCCACCCTGC AGCAGGGCCG CGAGTCCCTG ATGACCACCA CGCTCGACGG CAAGATCAAG
GCGCGGCTGG CAGGGCAGGG CGGTGACATC CGCGAGCCCG ACTGGGGTCC GTTCCAGCGC
CAGTGA
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| Protein sequence | MPMTIDRLLS PSSLAAVPRT SRRTLLAALA STPAIPALAQ FRVEVTGVGL TQLPIAIAAF
KGEGQAPQKI SAIIQADLER SGQFRAVDTA GVQLDETSRP DVAMWRQKSA DSLAVGSITR
LADGRYDVRF RLWDVVKGQD LGGQGFAVTT GDLRLVAHRI SDYIYEKLTG EKGVFSTRIA
YVTKAGSNYR LWVADADGEN AQSALSSPEP IISPAWSPTG TQLAYVSFES RKPVVYVHDV
ASGRRRLVAN FRGSNSAPAW SPDGNSLAVT LSRDGGSQLY LISAQGGEPR RLMQSSGIDT
EPNFSSDGRS IYFVSDRGGA PQIYKVPASG GSAERVTFTG NYNISPSVSP DGKWLAYVSR
VGGGFKLHVM DLGTGTVNAI TDTTADESPS FAPNSRLIVY ATLQQGRESL MTTTLDGKIK
ARLAGQGGDI REPDWGPFQR Q
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