| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3391 |
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| Symbol | |
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| ID | 5748976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3727891 |
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| End bp | 3728763 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641298495 |
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| Product | TatD family hydrolase |
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| Protein accession | YP_001564414 |
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| Protein GI | 160898832 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00650196 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGACAC GGAGGAAGTG CTCTCCGGTC GGCATGCCTG TTTCTGAACC ACGAGATTCC
ATGTTTACCG ATTCCCACTG CCATCTGAAT TTCCCCGAGC TGCAAAGCCG CCTGCCCGAG
ATCCGCGAGG CCATGGCGGC CGCGCGCGTC ACACGTGCGC TGTGCATCTG CACCACGATG
GAGGAATTCG GCGATGTGCA CCAGCTGGCG CTGGATCACG ACAATTTCTG GGCCACGGTG
GGCGTGCACC CCGATACGGA ACACATGACC GAGCCCAGCG TGGCCGACCT GGTCGAGCGC
GCCGCTCTGG CGCGCGTGGT GGCCATCGGC GAAACGGGAC TGGATTACTA CGGCATGGAA
GACCGCAAGG GCGGGCGCAC CATTGCCGAC TTGGAATGGC AGCGCGAGCG CTTTCGCGTG
CACATCCGCG CGGCGCGCCA GACGCAAAAG CCCCTGGTCA TCCACACGCG CAGCGCCTCT
GATGACACGC TGGCCATCCT GCGCGAAGAA GGCGAGGACG GCTCGGCAGG CCAGGCCGGC
GGCGTGTTCC ACTGCTTCAC CGAGACCATG GAAGTCGCGC GTGCGGCGCT GGACCTGGGC
TACTACATCT CCATGTCAGG CATCGTCACC TTCAAGAACG CCCAGCACCT GCGCGACGTG
GCCGCCTTCG TGCCGGCCGA CCGCCTGCTG ATCGAGACCG ACAGCCCCTA CCTGGCGCCC
GTTCCCTATC GCGGCAAGAC CAACAATCCG TCGTATGTGC CGTACGTGGC GCAGCAGATT
GCACAGGTGC GCGGCATGGC CATGGAGGAC GTGGCGGCCC TGACCAGTGC CAACTTCGAC
CAGCTGTTCA AGGGGGTTGT CGCATGCGAC TGA
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| Protein sequence | MPTRRKCSPV GMPVSEPRDS MFTDSHCHLN FPELQSRLPE IREAMAAARV TRALCICTTM
EEFGDVHQLA LDHDNFWATV GVHPDTEHMT EPSVADLVER AALARVVAIG ETGLDYYGME
DRKGGRTIAD LEWQRERFRV HIRAARQTQK PLVIHTRSAS DDTLAILREE GEDGSAGQAG
GVFHCFTETM EVARAALDLG YYISMSGIVT FKNAQHLRDV AAFVPADRLL IETDSPYLAP
VPYRGKTNNP SYVPYVAQQI AQVRGMAMED VAALTSANFD QLFKGVVACD
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