| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3389 |
|---|
| Symbol | |
|---|
| ID | 5748974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3726319 |
|---|
| End bp | 3727368 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641298493 |
|---|
| Product | DNA-directed DNA polymerase |
|---|
| Protein accession | YP_001564412 |
|---|
| Protein GI | 160898830 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.927863 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0484045 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGG CCCTGCCACA ACCGGCCGAG ACCGACACCG CCTGGATCGC CGGGCAACGC
GCGCGCCTGC TGGCCCAGCG CGGCCACGCC TGGCTGCTGC AGGGGCCTTC CGGCCTGGGC
CAGTACGCGC TGTCGCTGTC GCTGGTGCGC GCCTGGCTGT GCGAATCGCC GTCGCCCCAG
GGGGCGTGCG GCCACTGCGG CAGCTGCCAC GCCATCGACG TGCGCGCCCA TGCCGACCTG
TGCGTGCTCA TGCCCGAGGT GCAGATGATG GCGCTGGGCT GGCCGCTGCC CGAGAAGGCC
CAGGCCGATA TCGACGACAA GAAGCGCAAG CCCAGCAAGG AAATCCGTGT CGAGGCCATG
CGTGATGCCG TGGAGTTCTG CCAGCGCACC AGCGCGCGCG GGCGCGGCAA GGCCGTGCTG
GTCTATCCGG CCGAGCAGAT GAACGCCATC ACGGCCAATG CGCTGCTCAA GACGCTGGAG
GAGCCGCCGG GCGATGCCCG CTTCGTGCTG GCCAGCGAGG CGGCCCACCA GCTGCTGCCC
ACCATCCGCA GCCGTTGCCT GACTCACACC ATGGCCTGGC CCGATCAGCA AGAGGCCCTG
GCCTGGCTTC AGGGGCAGGG CGTGGCCCCG GAAGCGGCCG ACGTGGCGCT GCGCGCCGCA
GGCGGGCGGC CCGGCGACGC GCTGGCATTG GCGCACAGCG GTGGTGGCAA GGACATGGCC
GCATGGTCCC AGTTGCCGCG TGCGCTGGCC AAGGGCGATG TGGCGGCCCT GGCCGCCTAT
GCTCCGCCCC ATGCCGTGGA GGCCTTGCAG AAGATCTGCC ACGACCTGAT GGCCCTGGCC
GCAGGCGCCG CGCCGCGCTA CTTCACGCCC GCCGACCTGC CGTCGCGGCC GCTGGACATG
GGCCTGCTGG CCGAATGGTC ACGTGCCCTG GCCCAGGCTG CGCGCACGGC GGACCACCCC
TTCAACGCCG GACTCATGAC CGAGGCCCTG GCCGCCGAGG CCCGGCGCGT GCTCATGTCC
GGCCAGCCTG CCCGCCAGCG CCGGGGATGA
|
|---|
| Protein sequence | MSEALPQPAE TDTAWIAGQR ARLLAQRGHA WLLQGPSGLG QYALSLSLVR AWLCESPSPQ
GACGHCGSCH AIDVRAHADL CVLMPEVQMM ALGWPLPEKA QADIDDKKRK PSKEIRVEAM
RDAVEFCQRT SARGRGKAVL VYPAEQMNAI TANALLKTLE EPPGDARFVL ASEAAHQLLP
TIRSRCLTHT MAWPDQQEAL AWLQGQGVAP EAADVALRAA GGRPGDALAL AHSGGGKDMA
AWSQLPRALA KGDVAALAAY APPHAVEALQ KICHDLMALA AGAAPRYFTP ADLPSRPLDM
GLLAEWSRAL AQAARTADHP FNAGLMTEAL AAEARRVLMS GQPARQRRG
|
|---|
| |