| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3385 |
|---|
| Symbol | |
|---|
| ID | 5748970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3722672 |
|---|
| End bp | 3723535 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641298489 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_001564408 |
|---|
| Protein GI | 160898826 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase
[COG2153] Predicted acyltransferase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00858508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.169871 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACGCC AAGATTTCCG CACGCTGCAA CGCATTGAAG TGCGCTGGTC CGAAGTGGAC
GCCCAGAAGA TCGTCTTCAA CGCCCACTAC CTGATGTACG CCGACGTGGC CGTCACCGAC
TACTGGCGCC AGTTGGGCCT GCCCTATGAA TCGTCCTTCG CGGCCCTGGG TGGCGAGCTG
TTCGTCAAGA AGGCCACCAC CATCTACCAC GCATCGGCCA CGCTGGGCGA CGTGCTGCAT
GTGGGCATAC GCTGTGCCAG GCAGGGCAAT ACCTCGCTGT TGTTCGAGGC CGGCATCTTC
CGCGGGATGG AACTGCTCAA CACCGTGGAA CTGGTCTATG TGTTCGCCGA TGCCACCACG
CGCCAGCCGC TGCCCGTGCC GCAGCAGCTG CGCGACGTGC TCACGGCCTA TGAGGCCGGC
CAGAGCGTGG TGCGCGTGGC ATCGGGCAGC TGGAACGACC TGGGCCGCGA CGCCGAGCGC
CTGCGCCTGG CCGTGTTCGT GCACGAGCAG GGCGTGCCGC GCGAGATCGA GATCGACGAA
TTCGACCCCG TGGCCCGCCA CGCCGTGGTC TACAACGGCC TGGGCCAGCC GATCGCCACC
GGCCGCCTGG TCAGCGACAG CCCCGGCGCG GGCAGGATCG GCCGCATGGC CGTGGACCGC
AGCGTGCGCG GCGGCCGCTG GGGCCGCATC GTGCTGGACA GCCTGGTCGA AGCCTCCCGC
CAGCGCGGCG ACCGCGAAGT CGTGCTGCAT GCGCAGCGCC ATGCCGAGTC GTTCTACCTG
CGCGCGGGCT TCACGCCGGA AGGCGAGCCC TATGAAGAGG CCGGCATCCC CCACATCACC
ATGAGGAAAG TGCTCACCGC CTGA
|
|---|
| Protein sequence | MQRQDFRTLQ RIEVRWSEVD AQKIVFNAHY LMYADVAVTD YWRQLGLPYE SSFAALGGEL
FVKKATTIYH ASATLGDVLH VGIRCARQGN TSLLFEAGIF RGMELLNTVE LVYVFADATT
RQPLPVPQQL RDVLTAYEAG QSVVRVASGS WNDLGRDAER LRLAVFVHEQ GVPREIEIDE
FDPVARHAVV YNGLGQPIAT GRLVSDSPGA GRIGRMAVDR SVRGGRWGRI VLDSLVEASR
QRGDREVVLH AQRHAESFYL RAGFTPEGEP YEEAGIPHIT MRKVLTA
|
|---|
| |