| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3382 |
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| Symbol | |
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| ID | 5748967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3717522 |
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| End bp | 3720161 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641298486 |
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| Product | putative phytochrome sensor protein |
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| Protein accession | YP_001564405 |
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| Protein GI | 160898823 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0628] Predicted permease
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.164288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCAC ATCCCGACCC TGCGCCGTCG CCTTCACGGC AGGCCCTTCC TGCCGCCGCC
GAAGGCGGCA ATGCGGCCAA TGCAGCCGCG AATTCCGCCG CCCATGCCGC CACCCATGCC
GCCGCCCATG CAGATTTCGC GCGCAGCGTG CGTTCGGCCC TGCCGGGCCT GGCACAGCTG
GCCGACATGG TCCCCGCGCT GCGCCTGCTC ACCGGGCTGC TGGTGGCCAG CATCATCATC
GCGGGCCTGT ACTTCGGCCA GGGCCTGCTG ATTCCGCTGG CGCTGGCGCT GTTGTTCGGT
TTTTTGCTGG ATCCTGCGGT CTCCCGGCTC AAGCGCTGGG GCATGCCGCG CATGGCGGCC
ACGCTGCTGG TGGTGGTCAT GGCGCTGGCG ACACTGGCGG GAATGGGTAC CTATCTGGGC
AGCCAGGTGC AGCAGCTCAG CGCCGATCTG CCCACCTACC AGAACACCAT CCGCGACAAG
CTGCGCAGCC TGCGCAGGAA CGCCAACATG CCCAGTGCCT GGGACGGTGC GCTGCGCACC
TATGACACCG TGGAGCGCGA GATATCGCGC GGTGCCAACA CGCCCCGCGT GCAGAAGGTG
GAGATCCAGT CGCCCGAGCA AAAGCCCACG GCGCGCATGC TGCAGTGGCT GGGCCGCGTG
GCCGAGCCCG TGACCATGGC CGGCATCGTG CTGCTGTTCG TGATCCTCAT CCTGCTGGAC
CGCGATGACC TGCGCGACCG GCTGCTGCGC CTGATGGGCG GCAACCTGCA CGTGGCCACC
GACGCGCTGG ATGAGGCCTC GCAGCGCATA GGCAAGTACC TGCGCATGCA GTTCGTCGTC
AACATCACCT ACGGACTGCC CATGGCGGCG GGGCTGTGGT TCATTGGCGT GCCGGGCGCC
ATTCTCTGGG GCGTGCTGGC GGCCATCATG CGTTTCGTGC CCTATGTGGG GGCCATGATC
TCGGCCGCCT TCCCGCTGGC GCTGGCCTTT GCCGTGGACC CGGGCTGGCA GATGCTGCTG
ATGACGCTGG GCCTGATCAT GGCGCTGGAG CTGATCAGCA ACAACCTCAT CGAGCCCTGG
CTGTATGGCA GCAGCACGGG CCTGTCCACG CTGTCCATCA TCGTGTCGGC CACCTTCTGG
CCAGCGCTGT GGGGGCCGAT AGGGCTGATC CTGTCCACTC CGCTGACGGT CTGCCTGCTG
GTGCTGGGGC GCTACATCCC GGCGCTGCAA TTCATGGAAG TGCTGCTGGG CAGCTCGCCC
GTGCTGGGGC CGGCCCAGCG CCTGTACCAG CGCCTGCTGG CCGACGACGT GGAAGACGCG
GTCACGCTGG CGCATGAACT GGTGGACGCA AGGCTGCCGG CGCGCGCCTC GGCGGACGAA
CGCTCGGCCG CAGTGGCCGG TTTCTATGAC GAGGTGGCCA TCCCCGCATT GCGCCTGGCC
ACGCAGCAGC ACCTGGAGTC GGCCACGGCC GAACACCGGC TGCGCCTGTC CAGCGGCATG
GATGCCCTGA TCGAGGAACT GCGCGAAAGC CATCCGGCGC CCGCCGCTGC CCTGGCCACG
CGCGCCCTGC GCATCCATTG CGTGGGCGCG CGCTGGGAGG TCGATGCCCT GGCCGCCGCC
ATGGTGGCGC ACAGCGAGGC GCTGCGCGGC CACGTGGTCA GCTGCTCGGA CTGGGCCCTG
GCCGCCGACC CGCAATGGCG CCAGTTGGGA CCGGGGCAGG GCGGCCTGCC GCAAGGCCAC
GCAGGAGCCC AGGCCCTGGC CGAGGCGCAG TTGCTGGTGC TGTCCGTCTT CAGCACCCAG
CCCCAGACCG TGGTGCGCCA ACTGATGCGC CGCGTGCGCC GCCATTGGCC GCACCTGCGC
GTGGTGCTGG CGCTGTGGAA TGCGCCGGCC GTGGTGTCCG ACACCGAGTT CGCGCGCCGC
TGCGGCGCCG CCGCCTGCGT GTCCGGCCTG CGCGAGCTGC AGTTGTGGGT GGACGCCTTG
CGCCTGCCTG ACGCGGCAGG CCAGGGCCTG GCCGCGCCCA TTCCCGATGA CGATGAGCAG
CGCGTGCGCC AGCTGCACGA CAGCGGCGTG CTCGGGCCCG GCCTGCCGCA GCTGTACCAC
GAGGCAGCCC AGCAGGCCGC GAATGCCTTC GATGTGAAAT GGGCCCAGGT CTCATGGGTC
GATGCCGACC GCGTGCACAC GCCCGGCAGC CTGCTGGTGG CGGACCAGGG CGACCCGGCT
TCCGCCGGCA TGCCGCGTGC GCAGTCCATC TGCTCCTACG TGGTCCATGG CGGTGACGCC
CTGGTGGTGC ATGACGCCGC GCGCGACCCC CGATTTGCCG GCAACCCCGC GTTGCAGGCG
ATGCGGCTGC GCTTTTACGC GGGCGTCCCG CTCAAGAACC GCCACGGCAC GGTGCTGGGC
AGCTTTTGCA TCATGGACGA CGCGCCGCGC GAGGTCTCGG CGGCCGATCT GGAGCTGCTG
GGCGTCATGG CCGAGCAGTT GATGCAGAAC GTGGAGGTGC GCCGGATGAT GGAGGCTGGC
GCTGCACCGG CTCCGGTGCA GACTTCGGCA CAAACTCCGG CGCAAGTGGC ATCCCAAACG
ACACCCCAGC CACCATCGTC GTCACCATCG ACAACACCCC AGCCGAGTGC TGGCGGCTGA
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| Protein sequence | MNPHPDPAPS PSRQALPAAA EGGNAANAAA NSAAHAATHA AAHADFARSV RSALPGLAQL
ADMVPALRLL TGLLVASIII AGLYFGQGLL IPLALALLFG FLLDPAVSRL KRWGMPRMAA
TLLVVVMALA TLAGMGTYLG SQVQQLSADL PTYQNTIRDK LRSLRRNANM PSAWDGALRT
YDTVEREISR GANTPRVQKV EIQSPEQKPT ARMLQWLGRV AEPVTMAGIV LLFVILILLD
RDDLRDRLLR LMGGNLHVAT DALDEASQRI GKYLRMQFVV NITYGLPMAA GLWFIGVPGA
ILWGVLAAIM RFVPYVGAMI SAAFPLALAF AVDPGWQMLL MTLGLIMALE LISNNLIEPW
LYGSSTGLST LSIIVSATFW PALWGPIGLI LSTPLTVCLL VLGRYIPALQ FMEVLLGSSP
VLGPAQRLYQ RLLADDVEDA VTLAHELVDA RLPARASADE RSAAVAGFYD EVAIPALRLA
TQQHLESATA EHRLRLSSGM DALIEELRES HPAPAAALAT RALRIHCVGA RWEVDALAAA
MVAHSEALRG HVVSCSDWAL AADPQWRQLG PGQGGLPQGH AGAQALAEAQ LLVLSVFSTQ
PQTVVRQLMR RVRRHWPHLR VVLALWNAPA VVSDTEFARR CGAAACVSGL RELQLWVDAL
RLPDAAGQGL AAPIPDDDEQ RVRQLHDSGV LGPGLPQLYH EAAQQAANAF DVKWAQVSWV
DADRVHTPGS LLVADQGDPA SAGMPRAQSI CSYVVHGGDA LVVHDAARDP RFAGNPALQA
MRLRFYAGVP LKNRHGTVLG SFCIMDDAPR EVSAADLELL GVMAEQLMQN VEVRRMMEAG
AAPAPVQTSA QTPAQVASQT TPQPPSSSPS TTPQPSAGG
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