Gene Daci_3361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3361 
Symbol 
ID5748946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3690219 
End bp3690665 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content66% 
IMG OID641298465 
Productthioesterase superfamily protein 
Protein accessionYP_001564384 
Protein GI160898802 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.754262 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGATCTG AACTGGAGAA TTTCGTGCTG GATTTTGGCC ACCCCATCCC CTTCGTCGAC 
CACCTGGGTT TCACCCTGCA CCGCATGGAG GACGGGGAGT CCGAACTGCG CTTCGAGGCG
CGTCCCGAGC ACCTGAACAC CTTTGACGTG ACCCACGGCG GCGCCACCAT GACCCTGCTG
GACGTGACCA TGGCCGTGGC AGCACGCAGC CTGCAGCGCG ACATGGGCTG CGTGACCATC
GAGATGAAGA CCAGCTTCAT GCAGCCCGCA CGCGGCCCCC TGGTGGCCAA GGGCGTGGTG
CTGCACCGCA CGCGTTCCAT GGCCTATACC GAGGCGCGCG TGTTCGATGC CTCGGGCCGG
CTGTGCAGCC ATGCGACCGG AACGTTCAAG TACATGCCGC GCGTGGCCAA GCCGGCCGCT
GCCGAGACAA CCCTCGCCAC GGACTGA
 
Protein sequence
MRSELENFVL DFGHPIPFVD HLGFTLHRME DGESELRFEA RPEHLNTFDV THGGATMTLL 
DVTMAVAARS LQRDMGCVTI EMKTSFMQPA RGPLVAKGVV LHRTRSMAYT EARVFDASGR
LCSHATGTFK YMPRVAKPAA AETTLATD