| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3357 |
|---|
| Symbol | |
|---|
| ID | 5748942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3686861 |
|---|
| End bp | 3687820 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641298461 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001564380 |
|---|
| Protein GI | 160898798 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0416158 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.98402 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCCC TGCTCGACGC CATCGCCCGG ATGGCCCTGC CCTCCGACGC CCAACGCATC
TTCCACGGCC GTGGCGGCCT GTACCCGGGC TGCGAGCATC TGGTGCTCGA CGCCTTCCCG
CCCGTGCTGG TCCTCACCAG CTTCCAGCCG CTGGACGATG ACGCCCTGGC CGCCATCGGC
ACGGCGCTGT CACTGCGCTG GCGCGAACTG GCACCGGACC AGCCCCTGAA CTGGGTCTAC
CAACTGCGCC AGCCCGCCGC GCCCGCCGAA ACGCGGCTCA TGGCCGGTGA GGTGCCTGAC
CCCCACATCG TCACCGAGGC CGGCACGCGC TACCGCGTGC AGGTGCTGCG CGGCCAGAAC
CACGGCCTGT TCCTGGACAT GGCCGAAGGC CGGCGCTGGG TGCACGCGCA TGTCGCCAAC
CATCCCGAGC ACCGCCACGG CATCAAGGTG CTCAACCTGT TCGCCTATAC CTGCGCCTTT
TCGGTGGTGG CCCTGCAGGC CGGGGCGCGC CACGTGATGA ACATGGACAT GGCCCAGGGC
GCGCTGGCCA CGGGCCAGCA GAACCACCGG CTCAACGATC TGTCGGGCGC CAGTTTCCTG
GCCCACGACA TCTTCAGCAG CTGGGGCAAG ATCACGCGCG GCGGGCCCTA CCACCTGATC
GTGGTGGACC CGCCCAGCTA CCAGAAGGGC AGCTTCGTCG CCACCAAGGA CTATGCCCGC
CTGATGCGCC GCCTGCCCGA CCTGCTGCGC CCAGGCGGCC ATGTGCTGCT GTGCCTGAAC
GCGCCGGAGA TGGGCACGCA GTTCCTGACA TCGCAGATGC AGGAAGTGGC GCCCGAGCTG
GAGTTCGTCG AGCGCCTGGC CAACCCGGCC ACCTTCGCCG ACATCGACGC CGAGCGCAGC
CTCAAGGTGC TGGTCTACAG GGCACCCGCA ACACCCGCAG CGGCCGACAC GGCTTCCTGA
|
|---|
| Protein sequence | MQALLDAIAR MALPSDAQRI FHGRGGLYPG CEHLVLDAFP PVLVLTSFQP LDDDALAAIG
TALSLRWREL APDQPLNWVY QLRQPAAPAE TRLMAGEVPD PHIVTEAGTR YRVQVLRGQN
HGLFLDMAEG RRWVHAHVAN HPEHRHGIKV LNLFAYTCAF SVVALQAGAR HVMNMDMAQG
ALATGQQNHR LNDLSGASFL AHDIFSSWGK ITRGGPYHLI VVDPPSYQKG SFVATKDYAR
LMRRLPDLLR PGGHVLLCLN APEMGTQFLT SQMQEVAPEL EFVERLANPA TFADIDAERS
LKVLVYRAPA TPAAADTAS
|
|---|
| |