| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3353 |
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| Symbol | |
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| ID | 5748938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3681045 |
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| End bp | 3683255 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641298457 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001564376 |
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| Protein GI | 160898794 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.130298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.417052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCT CCCCACACAG CACAAGACAC ACCCGGCCCG CCCTGTCCAC CCTGGGCGCC
GCACTGGCCT GTACGCTGCA CGCGCTGCCC GCCCACGCGG CGGACGCAGC ACAGGACTCC
AGCGAGGCCC TGCTCGCACC CGTGGTCATC ACGGCCAGCC AGCCCGGCGC CGGCCCCGAC
CTGTGGCGCG CCACCGCCGC CATCGACAGC GTGGAAGGCG CCGTGCTGCG AGACGGGCAG
ATGCAGATCA ACCTGTCCGA GAGCCTGGCG CGCGTGCCGG GCCTGGTGGT GCTGAACCGC
CAGAACTTCG CTCAGGACCT GCAGATCTCG GTGCGCGGCT TCGGTGCGCG CTCCACCTTT
GGCGTGCGCG GGCTGCGCCT TTACGTGGAC GGCATTCCGG CAGGCGCGCC CGACGGCCAG
GGCCAGGCCG CCAACTTCAC GCTGGGCAAC GCCGCGCGCC TGGACGTGGT GCGCGGCCCG
GCCGCCGTGC TCTACGGCAA CAGCGCAGGC GGTGCACTGC TGCTGTACAC CGAAGATGGC
GAGGAACCGG GCCTGTGGCG CAGCGGCATG GCCGTGGGGC CGGACGGGCT GTGGCGCCTG
TCCACCCAGC TGCGCGGCAC GATCGGTGGC GGAAAGCCGG ACCAGGCGGA TGGCGGCTCC
GCCCCATGGC GCTATGCCAT CCACATCGAG CGCTTCGCCA CCGACGGCAT GCGCCCCCAG
TCGGCCGCAG ACCGCAGCAC GGCCCACATG AAGCTGTCAC GCAAGCAGGG CGACGACCAG
TGGCTGCTGC AGTACCAGGA GCAGCGCGCC AGCGCCCAGG ACCCGCTGGG CCTGACACGC
GCCGAGTTCG AGGCCGACCC CGGCCAGACC ACGGCCAGCG CGCTGCGCTT CAATACGCGC
AAAAGCGTGC GCCAGCGCCA GCTGGGTGCC GCCTGGCAGC ACCAGTTCGG CGCGGGCCAG
CGCCTGGAAC TCATGGCCTA TGCGGGTACG CGCTCCGTGC TGCAGTACCA AGCCATTCCC
GTGGCCACCC AGGCACCGCC CTCGCATTCA GGCGGCGTGA TCGACCTGGA CCGCGACTAC
GCAGGCATGA ACCTGCGCTG GCGCAGCACC CACGAGGATG TGGCTGGCGG CCGGCTGGAC
TGGTCGGCAG GCCTGGCCTA CGACTGGCAG GGCGAAACCC GGCGCGGCTA CGAGAACTTC
ATCGGCAGCC AGCTCGGCGT GCAAGGCCGG CTGCGCCGCG ACGAACGCAA CCAGGCGCGC
TCCGCCGACC CCTATCTGCA GGCCGAGTGG AGCACGCAGA GCCTGGCCCT GAGCGCCGGC
CTGCGCCAGG CGCGCGTGCG CTACCGGTCC GAGGACCACT ACATAGTCGC CGGCAATGGC
GACGACAGCG GCAGCATGGC CTGGCGCGGC TGGCTGCCCT CGCTGGGCCT GCGCGTGAAC
CTGCTGCCGG ACCTGGTGGC CCACGCATCG GTGGGCCGGG GCATGGAGAC GCCCACGCTC
AACGAAGTGG CCTACCGGCC CGGTGGCCAA AATGGCATGA ACAGCGGCCT GAACACCGGC
CTGGCCGCCA GCGCCCACAA CACCGTCGAG GTCGGCCTGC GCGGGCGCCA CGGCAACGCG
GGCTGGAACC TCACGCTGTT CGAGACCCAT ACCCAGCGCG AACTCACCGT GCTGTCCAAC
ACGGGCGGGC GCGCCACCTA CCAGAACGCA GGCCGCACGC TGCGCCGGGG GCTGGAATTC
TCGGGCAACG CGCAATGGGG GCCGCTCACG GCCAGCACCG CCCTGACCCT GCTGCAGGCC
CGCTACCGCG ACAGCTTCCT GACCTGCGAG GCCACGCCCT GCACCACGCC CACCGCCCCG
GTGGATGCCG GCGCGCGCCT GGCCGGCACC GCGCCGCGCC GCCTGTGGAG CGAGCTGGCC
TGGCAGCTGT CGCCGCAATG GACCTGGACC GTGGACATGC TGCACAGCGG CCCCGTGGCC
GTGAACGACC GCAACACCGA CCGCGCGGCC GGCTACACCG TCTGGGGCTC CAGCCTGCGC
TGGTCACGGC AATGGCAGCA GTGGAGCGCC CAGACCTTTG TGCGGCTGGA CAACCTGTTC
GACCGGCGCT TTGCAGGGTC GGTCATCGTC AACGAGGGCA ACCAGCGGTT CTTTGAGCCG
GGTGCGGGAC GCGGGCTGTC GGCCGGGGTG ACGGTCAGCC GGACGTTCTG A
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| Protein sequence | MTRSPHSTRH TRPALSTLGA ALACTLHALP AHAADAAQDS SEALLAPVVI TASQPGAGPD
LWRATAAIDS VEGAVLRDGQ MQINLSESLA RVPGLVVLNR QNFAQDLQIS VRGFGARSTF
GVRGLRLYVD GIPAGAPDGQ GQAANFTLGN AARLDVVRGP AAVLYGNSAG GALLLYTEDG
EEPGLWRSGM AVGPDGLWRL STQLRGTIGG GKPDQADGGS APWRYAIHIE RFATDGMRPQ
SAADRSTAHM KLSRKQGDDQ WLLQYQEQRA SAQDPLGLTR AEFEADPGQT TASALRFNTR
KSVRQRQLGA AWQHQFGAGQ RLELMAYAGT RSVLQYQAIP VATQAPPSHS GGVIDLDRDY
AGMNLRWRST HEDVAGGRLD WSAGLAYDWQ GETRRGYENF IGSQLGVQGR LRRDERNQAR
SADPYLQAEW STQSLALSAG LRQARVRYRS EDHYIVAGNG DDSGSMAWRG WLPSLGLRVN
LLPDLVAHAS VGRGMETPTL NEVAYRPGGQ NGMNSGLNTG LAASAHNTVE VGLRGRHGNA
GWNLTLFETH TQRELTVLSN TGGRATYQNA GRTLRRGLEF SGNAQWGPLT ASTALTLLQA
RYRDSFLTCE ATPCTTPTAP VDAGARLAGT APRRLWSELA WQLSPQWTWT VDMLHSGPVA
VNDRNTDRAA GYTVWGSSLR WSRQWQQWSA QTFVRLDNLF DRRFAGSVIV NEGNQRFFEP
GAGRGLSAGV TVSRTF
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