Gene Daci_3351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3351 
Symbol 
ID5748936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3677781 
End bp3678662 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content67% 
IMG OID641298455 
Producthypothetical protein 
Protein accessionYP_001564374 
Protein GI160898792 
COG category[C] Energy production and conversion 
COG ID[COG4313] Protein involved in meta-pathway of phenol degradation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0824985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.65514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCCA AGCCCTTTAC CCGCGCATCC CTGGCCCTGG CAGCCATGGC CGCATGCGCC 
ACCTTCAATG CCCACGCCGT CGATATCGAC GCGGGCGACT ACACCGCCCT GCCGCCCGGC
ACCACGCTGG GCATGGTCTA TTACCAGCAC GCCACGCGCG ACAGCCTCTA TGCCAATGGC
GACCAGGCGC CCATACGGCC GAGGCTGACC TCGGACATCG GCATTGCGCG CGGCGTGCAC
TTCATGAAGC TGGGCGACTA TGTGATCGAC CCGCAGTTCC TGCTGCCCTT CGGGCGCCTG
TCGGCCTCGC GCGATATCGC GGCCATGGGC AGCAATACCG GCGTGGGCGA CCTGATGCTG
GCCGCCACCC TGTGGCTGAC GAAGCCCGGC GACAAGGAGC ACTTCGGCAT CACCCCCTTT
GTCTGGCTGC CCACGGGCCA GTACAACCGC AACGATCCGC TGAGCCTGGG CGAGAACCGC
TGGAAGGCCG CCCTGCAGGC CGGCTGGATC AAGCCGCTGG GCAAGAGCGT GACCATGGAC
CTGGCGGCCG ATGTCACCGT CTTCGGCAAG AACGACGACT TCGGCGCCCA CAGCGCCACG
CTCAAGCAAA AGGCGCAGTT CCAGTTCCAG GGCCTGCTGC GCTACCACCT GTCGGACACA
TCGGACCTGC GCCTGGGCCT GTCGCACCTG ACGGGCGGCG AGACCCAGGT CAACGGCGTG
GCGCAAGGCG ACCGCCAGTC CACCACCAAG GTCTCTTTCG GCGGCGCGGT CTTTGTCGCA
CCCAAGACGC AGCTGCTGGC CACCGTGGGC CGCGATCTGC ATGTGCGCCA GGGCTTCAAG
GAGAACGCCC GCATCAACCT GCGCCTGCTG CAGGTTTTCT GA
 
Protein sequence
MPSKPFTRAS LALAAMAACA TFNAHAVDID AGDYTALPPG TTLGMVYYQH ATRDSLYANG 
DQAPIRPRLT SDIGIARGVH FMKLGDYVID PQFLLPFGRL SASRDIAAMG SNTGVGDLML
AATLWLTKPG DKEHFGITPF VWLPTGQYNR NDPLSLGENR WKAALQAGWI KPLGKSVTMD
LAADVTVFGK NDDFGAHSAT LKQKAQFQFQ GLLRYHLSDT SDLRLGLSHL TGGETQVNGV
AQGDRQSTTK VSFGGAVFVA PKTQLLATVG RDLHVRQGFK ENARINLRLL QVF