| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3342 |
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| Symbol | |
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| ID | 5748927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3666227 |
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| End bp | 3667165 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641298446 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_001564365 |
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| Protein GI | 160898783 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0058629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.508652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCA TCTCGAATTA TCGCGGCATC ATTCCCGCCA TTTCCTGCCC CTTCACGCCC
GACCACCGCA TCGACGAGCC CGCGCTGCGC AGGCTGGCAT CGTGGCTGGC AGGCCATGAG
GGCGTGGTCG CCGTGATGAC CAACGGCCAT ACGGGCGAGG TGTTCGCGCT GACGCCGGCC
GAGCGCGCCG AGGTCACGCG CATCGTGGCC GACGAGCTGC GGGGCCGGCT GCCCGTGATC
TCCTCCATCG TCTGCGAAGG CCTGGCCGAT GCGGCCGAGC ATGCGCGTGC CGCCCAGGCC
GCAGGCGCGG TGGCGCTGGA TGTGATGCCG CCCCACCACT GGCTGCGCTT CGGCTTCACG
CCCGGCCATG CGCTGCAGTA CTTCGAGGCC ATCCACCGCG CCGCGCCGGA CCTGGACCTG
GTCTGCCACG TCTACCCGGC CTGGACGCGT GCCTCCTACT CCTCGCAGCT GCTGGCCGAG
CTGGCGCGCC TGCCCTACGT GCAGGCCTTC AAGGTGGGCC AGCGCGACAT GAACAAGTAC
GCCCGCGACA TCCAGGCCAT CCGCGAGGCC AATCCCGCCA AGGCCATCCT GACCTGCCAT
GACGAGTACC TGCTGGCCTC CATGGTCCAG GGCGTGGACG GCGCCCTGGT CGGCTTCGCC
ACCTTCATCC CCCAGCTCAT CATCGACCTG TGGAATGCCG TCAAGGCCGG CGACCTGAAG
AAGGCCATAG CGGTGCAGGC CGTGATCACG CCGCTCAAGG ACGCCGTCTA CGGCGGCGGC
GAGCCCACGG GCGAGGCCCA CGCCCGCATG AAAGGCGGCA TGTACCTGGC CGGCGTGATC
GACGACGCCA CCGTGCGCCC GCCCACCGAG GCGCCCAACG CCCAGGAGCT GCAGGCCCTG
CGCGCTGCCG TGGCGCAGGC CGGGCTGCTC AAGCGCTGA
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| Protein sequence | MTSISNYRGI IPAISCPFTP DHRIDEPALR RLASWLAGHE GVVAVMTNGH TGEVFALTPA
ERAEVTRIVA DELRGRLPVI SSIVCEGLAD AAEHARAAQA AGAVALDVMP PHHWLRFGFT
PGHALQYFEA IHRAAPDLDL VCHVYPAWTR ASYSSQLLAE LARLPYVQAF KVGQRDMNKY
ARDIQAIREA NPAKAILTCH DEYLLASMVQ GVDGALVGFA TFIPQLIIDL WNAVKAGDLK
KAIAVQAVIT PLKDAVYGGG EPTGEAHARM KGGMYLAGVI DDATVRPPTE APNAQELQAL
RAAVAQAGLL KR
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