Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3336 |
Symbol | |
ID | 5748921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3659778 |
End bp | 3661343 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641298440 |
Product | phosphonate ABC transporter, inner membrane subunit |
Protein accession | YP_001564359 |
Protein GI | 160898777 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.45187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTGA GTTCCGATCT GCACGCGCTG CGTGATCCCG CCGCGCCCCG CCGCCTCGGC GCACTGGTAC TCGCCGCCGT CGTTCTGTGG CCGCTGTTCC AGGGCGCAGG CTTCAGCCTG GGCGCGCTGT TCGATCCCGG CAACCTGCAG GTCATCGGCC GCTTTCTGGC CACGTTTCTG CCGCCCGAGA CCGGGCGCGA CTTCCTCGGC TACCTGGGCC GCGCCACGCT GGAGACCCTG GCCATTGCCA CGGCCGGCAT GGCCCTGGCC TTTGTGCTGG CCGTGCCGCT GGCCTACCTT GTCACGGGCG CCGCGCGCGA GCGGCGGGCG CTCAAGCCCG TCACGCGCGG CCTGCTCACC ATCCTGCGCG GCGTGCCCGA GCTGGTCTGG GCCCTGGTCT TCGTGCGCGT CTTCGGCCTG GGGCCGGCCG CTGGCGTGCT GGCCCTGGGA CTGACCTATG GCGGCATGCT GGCCAAGGTC TATGCGGAAA TCCTGGAGTC GGCCGACCCC GCACCCGCAC GTGCCCTGGC GCAGGCGGGC GCGCGCCGGC CGCTGGCCAT GCTCTACGGC CTGCTGCCCC AGGCAGCGCG CGAGCTGACC TCGTACACCG TCTACCGCTG GGAGTGCGCC ATACGCGCCT CGGTGGTCAT GGGCTTTGTG GGCGCGGGCG GCCTGGGCCA GCTCATGGAC CAGGCCATGA AGATGCTCAA CGGCGGCGAG GCCTCCACCA TCTTGCTGAC CTTCATGCTG CTGGTCTGGG GTGCCGACCT GCTCTCGCGC GGCCTGCGCC GCGCGCTGGA CACGCCACCC GCCGCGCGTG CCAGCGCCTG GGGCTGGCGC AGCGCCCTCA CCTGCGCCGC CCTGGCGCTG GGCGTGGCCG CCAGCTTTGC CATGCTGGAG ATGGACCTGC CCTCGCTGTT CACCGGCGCG GCGGGCCGGT CCATGCTGGA GTTCGTCATC AGCTTCTTCC CGCCCGACAC CAGCGCCGAA TGGCTGCGCA AGGTGGCCGT GGGCGTGTGG GAGACGCTGG CCATCTCCGT GGTAGGCACC CTGCTGGCGG CCGTGCTGGG CCTGCTGCTG GCGTTGCCGC GCTGGCGCGC TCCCTGGAGC CTGGTGCTCA ACGTGCTGCG CTCCGTGCCC GAGCTGGTCT GGGCCACCAT CACCGCCCTG GCCGTGGGCC TGGGCCCGTT CGCAGGCGCG CTGGCGCTGG CGCTGCACAC GGCGGGCGTG CTGGGGCGCC TGTATGCCGA GGCCCTGCAG AACCAGCCCG CCGCCCCCAC CCAAGCGCTG CGCCTGTCCG GCAGCGGCCG CGCCATGGCC TTCCTCTACG CGACGCTGCC CGGCGCCGCG CCGCAGTTGC TGGCCTATAC GCTGTACCGC TGGGAGATGA ACATCCGCAT GGCCGCCATC CTGGGCTTCG TGGGCGCGGG CGGGCTGGGG CAGCTGCTGT ACTTCGAGCT GTCGCTGTTC CACTATGCCC AGGCCAGCAC CGTCATCATC GCCATGCTGG CGCTGTCCGT GGCCGTGGAC TGGGCCAGCG CGGCGCTGCG CAGGCGCATG GGTTAG
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Protein sequence | MPLSSDLHAL RDPAAPRRLG ALVLAAVVLW PLFQGAGFSL GALFDPGNLQ VIGRFLATFL PPETGRDFLG YLGRATLETL AIATAGMALA FVLAVPLAYL VTGAARERRA LKPVTRGLLT ILRGVPELVW ALVFVRVFGL GPAAGVLALG LTYGGMLAKV YAEILESADP APARALAQAG ARRPLAMLYG LLPQAARELT SYTVYRWECA IRASVVMGFV GAGGLGQLMD QAMKMLNGGE ASTILLTFML LVWGADLLSR GLRRALDTPP AARASAWGWR SALTCAALAL GVAASFAMLE MDLPSLFTGA AGRSMLEFVI SFFPPDTSAE WLRKVAVGVW ETLAISVVGT LLAAVLGLLL ALPRWRAPWS LVLNVLRSVP ELVWATITAL AVGLGPFAGA LALALHTAGV LGRLYAEALQ NQPAAPTQAL RLSGSGRAMA FLYATLPGAA PQLLAYTLYR WEMNIRMAAI LGFVGAGGLG QLLYFELSLF HYAQASTVII AMLALSVAVD WASAALRRRM G
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