Gene Daci_3321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3321 
Symbol 
ID5748906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3642666 
End bp3643709 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content59% 
IMG OID641298425 
Producthypothetical protein 
Protein accessionYP_001564344 
Protein GI160898762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.630565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.105532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGCTCA CCATGGACAC TACAAAGCAC ATCAATCCAG ACCACTATCT GGAAACCGAA 
CAAGGTCGCC TGTTCACCCC GGAACGCAGT GCTGCCGCAT GGGAGTTGGC GTACCGGGAC
TTGGACAAAG CACTGTCTGT CAGCTCGCCC GCGACCAAGC TCTATGTGGT GGTGGGGGTG
CAAGCTGCAG GCAAGAGCAG CTGGATTCAA CAGAACGCCC TAGCGTTGGG TGGTGATGCG
GTGTTCTTTG ATGCCGCCCT TCCGAAGGCG GTGCATCGTG AGCGTTCCAT TCAGATCGCC
AGATCACATG GGGTGCCGGT AGTCTGTATT TGGCTCAAAG CCGATTTGCA GACCGCCTTG
CGGAGGAACA CGCAGCGGCG AGCCGATCAC CAAGTGCCGG AGCAGGCCAT TCGCAGCGTG
TTTGCCATGT TCGAGCCGCC GAGTGAGCAG GAAGGGTTCG CGGTAATCCA TATCGATGAC
ACCGAGCCGG CCCCCGGGAG CTCCATCCAG CCCATGGGGC CGCGCCAGTT CCCGTCCCTT
CAGGATCTCG ACCAGCAGGT GATTGTGGGC TGGCGAGCTT GCGAGATGGC GTTGGCCGAA
GGCGGCCGCT GGGATATGGA TGAATCAGGT CGGCAGCACT GGGTACCTGG CGAAGCAGTC
TGGAGCCATC CGCAGGTGCC CTATCTCCAG TTCATCGAGA TTTGGATCCA ACTGGTGGAC
GGACGTGTCT GGTCAATGCT TTCCCGTATC GACGATGGCA GCGGTTTTCA CGGCCTGTAC
CTTGTGACTC CAGAGGCGTC TGAGTCGGAT CCCGGCGTGC CTGCATCCAT TGGTTACCGT
GACCGACTGC TGGCTGAGTT GCCCTTGGGT CTTGTGCGGA TAAAAGACAT GCGCCGGGAT
GCAGATGGCT TTGTCGTGGA GATGTGCATG CTCATCGGCC AGAAAGTGGT TCGGTTCCTG
TCAGGGGAGG TCTATGAGCG GGGTCAGGGC CTGTTTGAAG TCATAGAGCT TGATGAATCG
ATACTCGTCC AGATAGAAAG CTAG
 
Protein sequence
MQLTMDTTKH INPDHYLETE QGRLFTPERS AAAWELAYRD LDKALSVSSP ATKLYVVVGV 
QAAGKSSWIQ QNALALGGDA VFFDAALPKA VHRERSIQIA RSHGVPVVCI WLKADLQTAL
RRNTQRRADH QVPEQAIRSV FAMFEPPSEQ EGFAVIHIDD TEPAPGSSIQ PMGPRQFPSL
QDLDQQVIVG WRACEMALAE GGRWDMDESG RQHWVPGEAV WSHPQVPYLQ FIEIWIQLVD
GRVWSMLSRI DDGSGFHGLY LVTPEASESD PGVPASIGYR DRLLAELPLG LVRIKDMRRD
ADGFVVEMCM LIGQKVVRFL SGEVYERGQG LFEVIELDES ILVQIES