Gene Daci_3318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3318 
Symbol 
ID5748903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3640950 
End bp3641423 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content67% 
IMG OID641298422 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001564341 
Protein GI160898759 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0859673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCACCCA TGACCGATAT CCGCCCCGCC CGCTTCCCCG AAGACCTCGA CGCCGTGGTC 
CGCATCTTCC GGGAATACGT GGCCAGTCCC ACCGTGAGCC TGGACTTCCA GGACTTCGAG
ACCGAGTTCG CCGCCCTGCC CGGCAAGTAC GCCGCACCCG AAGGCTGCGT GCTGCTGGCC
TGGAAAGACG GCCAGCCCGT GGGCTGCGCC GCCCTGCGCC AGGTGGATGC GCAGACAGGC
GAAATGAAGC GCGTCTACGT GCGCCCCACG GTACGCAGCG AGAACCTGGG GCGCCGCCTG
GTGGAAGGCA TCCTGGACGC TGCGCGCCAC GCAGGCTACA CCCGCATCTG CCTGGACGTG
CTGCCCGAGT TCCAGGCCGC GCAGCGGCTG TATGAAAACC TGGGTTTTGT GGATGCGGAA
CCGGTGAGCT TCAATCCCGT GCCGGGCACG CGTTATCTCG GACTGGATCT TTGA
 
Protein sequence
MAPMTDIRPA RFPEDLDAVV RIFREYVASP TVSLDFQDFE TEFAALPGKY AAPEGCVLLA 
WKDGQPVGCA ALRQVDAQTG EMKRVYVRPT VRSENLGRRL VEGILDAARH AGYTRICLDV
LPEFQAAQRL YENLGFVDAE PVSFNPVPGT RYLGLDL