Gene Daci_3317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3317 
Symbol 
ID5748902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3639568 
End bp3640395 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content54% 
IMG OID641298421 
Producthypothetical protein 
Protein accessionYP_001564340 
Protein GI160898758 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0168552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCCT CCATTGCCGC CACCTTCTAT CAGATCGGCT ATGCCGACAT GCTTGCTCGC 
CAAATGGAGC AAAAACAGAT CGATGCCATT GTGCTCACGC CACAGGAATA CGCAGACATA
CTGAGCGACA AGGCGCGTAA CAATCCTCGC CTGGCGGCCA CGCTGCATGC CATGCTGGCC
CACAGTGCGC TTGGGCGATA CTGGACACAC ACCGCCAGCC CGAATGCAGG CAAACCCTGG
GTCGCTCCCG CCTCCCTGAT GGTCAGCGAC GCGTACCTGA TCACCAAAAC GCTGATTGCA
TTGGGCTTGG CCGGTGCCCG CTCCTATATC AAGACAACCG CCACAGGCAC CTATATCATC
ATCACGGGCT ACGCGGGACT TCGCCGCCAG TTGCTGCAAG GCACGCGATT CCTTGCCGCC
AATCCGAGCA TGGTCCAGAT GGGCCTGGGT ATTCGCGGTC TGCAGAATGT GGCCAAGGGC
GGGTTCCTTC TGAGCCTGGT GGTGGGCACC GGGATAGAGT CACTGGACTT CATCTTCAAT
GACGAGAAGA CCATGCATGA TCTTGTGGGT GGGATTGGAG TGGAGGCGGT CAAGGCGGGA
TTGGCGACGA TGATTGCAAT AAGTGCGGGA GCCCTAACTG CAAGCGTTAC CACTTTGGTC
ATTTTTCCGC TAGGAGCGAT GGCGTTAGCC ATATTTGCCA CTGGAGCACT TCTCAACTAC
ACAGATCAGC GATGGAAAAT AAAACAAAAC GTTATTACAG CCCTAAAGTC TGTAAACAAT
GAAAAAGCAC CAGGCATATA TAAACTAGAT CAAAGCACCA TTCAATAA
 
Protein sequence
MPASIAATFY QIGYADMLAR QMEQKQIDAI VLTPQEYADI LSDKARNNPR LAATLHAMLA 
HSALGRYWTH TASPNAGKPW VAPASLMVSD AYLITKTLIA LGLAGARSYI KTTATGTYII
ITGYAGLRRQ LLQGTRFLAA NPSMVQMGLG IRGLQNVAKG GFLLSLVVGT GIESLDFIFN
DEKTMHDLVG GIGVEAVKAG LATMIAISAG ALTASVTTLV IFPLGAMALA IFATGALLNY
TDQRWKIKQN VITALKSVNN EKAPGIYKLD QSTIQ