| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3308 |
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| Symbol | |
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| ID | 5748893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3628283 |
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| End bp | 3629518 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641298412 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001564331 |
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| Protein GI | 160898749 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.663851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0340537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGGA TCGTGCATTC GGTGGCCGCC TCGGCCATGC TGGCCTGTGC ATCGGGCGCC
TGGGCGCAAA AGGGCGAGAC GGTGAAGATC GGCTGGATCG ATCCGCTGTC GGGTCTGATG
GCCGCCGTGG GCACGAACCA GCTCAAGACC TTCCAGCTGA TGGCCGAGGA GTTCAACAGG
AAAAATGCCT CGGGCGTGAA GTTCGAGATC ATCCCGCTGG ACAACAAGCT CAGCCCGCAG
GAGACCACGG CCGTGCTGCG CTCGGCCATG GACCAGGGCG CACGCTACGT GGTGCAGGGC
AACGGCTCGG GCCCGGCCCT GGCCATCATG GATGCGCTGG AAAAGCACAA CGCGCGCAAC
AAGGGCAAGG AAGTCGTCTA CCTGAACTAT GCGGCCGTGG ACCCGGACCT GACCAACAGC
AAGTGCAGCT ACTGGCACTT CCGCCTGGAT GCGGACACCT CCATGAAGAT GGAAGCGCTG
ACGACCTATA TGAAGGACGT GCCCGAGGTC AAGAAGGTCT ACCTGATCAA CCAGAACTAC
TCGCACGGCC AGCAGGTCTC CAAGTACGCC AAGGAAATGC TCAAGGCCAA GCGGCCTGAT
GTGCAGGTGG TGGGCGACGA CTTCGCGCCC CTGGCCCAGG TGCGCGACTT CGCGCCCTAC
ATCGCCAAGA TCAAGCAGTC GGGCGCCGAC ACGGTGATCA CGGGCAACTG GGGTTCTGAC
CTGTCGCTGC TGCTCAAGGC GGCCAACGAC GCGGGCCTGA ACAACGTCAA GTTCTACACC
TACTACGCCT TCGGCTCGGG CTCGCCCACG GCCATGGGCG CGGCCTCCGA CGGCAAGGTC
TACACCGTGG GCTATGGCCA CTACAACATG GGCGGCCCCA TCCAGCCGCT GATGGCCGAG
TTCAAGAAGA AGATGAACGA CGACCTCACG CAAAGCTCGA TCTACCACGT GTTCGCGCTG
CTGGATGCGG CCTTCGTCAA GACCGGCGGC ACCGACCCCG TGAAGGTGGC GGCCGCGCTG
GAGGGCATGA AGCTCAAGAG CTTCAACGGC GAAGTGGAGA TGCGCAAGAC CGACCACCAG
CTGCAGCAGG GCCTGTACAT CACGCGCTGG GAAAAGGCCG GCGGCAAGAA CCCGTATGAC
GCAGAGAACA CGGGCTACAC CTTCGCCCCG GTGAAGTACT ACGAGCCCTA CGTGGCCAGC
ACGCCCACCT CCTGCCAGAT GAAGCGCCCG TCCTGA
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| Protein sequence | MKWIVHSVAA SAMLACASGA WAQKGETVKI GWIDPLSGLM AAVGTNQLKT FQLMAEEFNR
KNASGVKFEI IPLDNKLSPQ ETTAVLRSAM DQGARYVVQG NGSGPALAIM DALEKHNARN
KGKEVVYLNY AAVDPDLTNS KCSYWHFRLD ADTSMKMEAL TTYMKDVPEV KKVYLINQNY
SHGQQVSKYA KEMLKAKRPD VQVVGDDFAP LAQVRDFAPY IAKIKQSGAD TVITGNWGSD
LSLLLKAAND AGLNNVKFYT YYAFGSGSPT AMGAASDGKV YTVGYGHYNM GGPIQPLMAE
FKKKMNDDLT QSSIYHVFAL LDAAFVKTGG TDPVKVAAAL EGMKLKSFNG EVEMRKTDHQ
LQQGLYITRW EKAGGKNPYD AENTGYTFAP VKYYEPYVAS TPTSCQMKRP S
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