| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3294 |
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| Symbol | |
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| ID | 5748879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3611331 |
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| End bp | 3612212 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641298398 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_001564317 |
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| Protein GI | 160898735 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.186512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCG ACCACTCCCC TTCGACCGCC GCATCCCCCG AACCGGCTCC CGCCGCGCGC
AAGCGCTATG CCCGCGTGCT CATCATCGCG GGCTCCGACA GCGGCGGCGG CGCCGGCATA
CAGGCCGACC TCAAGACCTG CAGCGCCCTG GGCTGCTACG GCATGACGGC CATCACGGCC
ATCACCGTGC AGAACACGCT GGGCGTCAGC GGCATCCACG GCATTCCCGT GGACATACTG
CGCGGCCAGA TCGATGCGGT GGTCGAGGAC ATCGGCGCCG ACGCCGTCAA GATCGGCATG
CTGGCCACGC CCGAGGTGGT GCAGGTGGTG GCCGATGCCA TCCGCCGACA CCAGCTGCGC
AACGTGGTGC TGGACCCCGT GATGGTGGCC ACCAGCGGCG ACCGGCTGAT CGCGCCGGAA
ACCGCCTCCG TGCTGGTGCG CGAGCTGTTC CCCCTGGCCA CCGTGGTCAC GCCCAATCTG
GACGAGGCAG CGCTGCTGCT GGGCCGCTCT ATTGATGGCA TAGACGCACT GGACGGCGCC
GTGCAGGAAC TGCTGGCGCT GGGCGCGCCG GCCGCCTTGC TCAAGGGCGG GCACTTGTCG
GGCGATCTGG TGGTGGACCT GCTGGGCCAT GGCAACGGCC AGCGGCTGCG CCTGCAGTCG
CAGCGCATTG CCACGCACAA CGGGCACGGC ACGGGCTGCA CGCTGTCTTC GGCGATTGCC
TCTCACCTGG CGCTGGGCCT GCCGCTGGAT GCGGCCGTGG CCCAGGCGCG CGAGTACATC
CTGGGCGCGA TTGCGGCCGG CGCCGATGTG TTCACGGGCG CCGGCCATGG CCCGCTGAAC
CACGGTTATG CGCCGCGCGC GCAGGTCGTG GTCAACGGCT GA
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| Protein sequence | MTADHSPSTA ASPEPAPAAR KRYARVLIIA GSDSGGGAGI QADLKTCSAL GCYGMTAITA
ITVQNTLGVS GIHGIPVDIL RGQIDAVVED IGADAVKIGM LATPEVVQVV ADAIRRHQLR
NVVLDPVMVA TSGDRLIAPE TASVLVRELF PLATVVTPNL DEAALLLGRS IDGIDALDGA
VQELLALGAP AALLKGGHLS GDLVVDLLGH GNGQRLRLQS QRIATHNGHG TGCTLSSAIA
SHLALGLPLD AAVAQAREYI LGAIAAGADV FTGAGHGPLN HGYAPRAQVV VNG
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