| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3293 |
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| Symbol | |
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| ID | 5748878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3609858 |
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| End bp | 3611054 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641298397 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001564316 |
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| Protein GI | 160898734 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.204133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCAGCA CATGCCCTGT GCGCGGACAG CCGGCCGGCA GTCCCACGGG CATGGGCGCA
CTTGACCACC AGATGCACAT GTCCGTTCTA CAAGCTTCTT CCCGCATCGC CATTCTGGGC
GGCGGCCTCA TGGGCCGGCT GCTGGCATTG GCGCTGGCCC GTCGCGGCCA CGGCATTGCC
GTATACGACG CCCACGGCCC CGAAGGCGAT GGCGCCGCGG CCCGCGTGGC AGCCGCCATG
CTCGCGCCCC TGGCCGAATC GGCCATCACC GAGCCCGGCG TGGTGCGCAT GGGCCAGCAC
GGCCTGACGC GCTGGCCCGA ACTGCTGGCC CAGCTCGATG CGCCCGTGTT CTTCCAGCAA
AACGGCACCC TCATCCTCTG GCACCGCCAG GACGCGGGCG ATGCCCAGCG CTTCTTCGGC
CTGCTGGAGA AAAACCGCCG CATCAACCCC AGCCTTCCCG CGCTGCAGCC GCTGGCCGAC
CAGGCCCTGC ACGACTGCGA GCCCGCGCTT GAGCGGCGCT TTGCCCAGGC CATGTACCTG
CAGGGCGAGG GCCAATTGGA CAACCGCCAG CTGCTGGCCT CACTCCACGC CACGCTGACC
CGCCTGGGCG TGGAGCAGCA CTGGAACCAG CCGCGCGAGC TGGCCGACTT CCGTCCCGGC
ACGCCGGGCC AGCCCGACTG GGTGCTGGAC TGCCGGGGCC TTGGCGCACG CGGCCAGTGG
CCTGCGCTGC GCGGCGTGCG CGGCGAGGTG GTGCGCATCC ACGCGCCCGA GGTCACGCTG
CAGCGGCCCA CGCGCCTGAT CCATCCGCGC TACCCGATCT ACATTGCGCC CAAGGAGGAC
CACCTCTTCG TCATCGGCGC CACCGAGATC GAGTCCGACG ACATGTCGCC GGCCAGCGTG
CGCTCCACGC TGGAGCTGCT GAGCGCCGCC TACACCGTGC ATCCGGGTTT TGCCGAAGGC
CGCATCGTCG AGATCGCCAC CCAATGCCGC CCCACCCTGC CCGACAATCT GCCGGCCGTG
CGCTGGAGCG CGCCGCGCGT GATGGAGGTC AACGGCCTGT ACCGCCATGG CTTCATGATC
GCGCCGGCCA TGCTGGACGT GGTGCTGGAG CTGCTCGACA GCGGCGATTC CGAACTGGCC
CGCCGCTTCG ATGTTGCCGT CGAGCATGCG CCATCGCAGC ACAAGGCAGC CGCCTGA
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| Protein sequence | MSSTCPVRGQ PAGSPTGMGA LDHQMHMSVL QASSRIAILG GGLMGRLLAL ALARRGHGIA
VYDAHGPEGD GAAARVAAAM LAPLAESAIT EPGVVRMGQH GLTRWPELLA QLDAPVFFQQ
NGTLILWHRQ DAGDAQRFFG LLEKNRRINP SLPALQPLAD QALHDCEPAL ERRFAQAMYL
QGEGQLDNRQ LLASLHATLT RLGVEQHWNQ PRELADFRPG TPGQPDWVLD CRGLGARGQW
PALRGVRGEV VRIHAPEVTL QRPTRLIHPR YPIYIAPKED HLFVIGATEI ESDDMSPASV
RSTLELLSAA YTVHPGFAEG RIVEIATQCR PTLPDNLPAV RWSAPRVMEV NGLYRHGFMI
APAMLDVVLE LLDSGDSELA RRFDVAVEHA PSQHKAAA
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